PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM82371.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

AP2

Protein Properties

Length: 409aa MW: 45403.1 Da PI: 6.3246

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM82371.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	51.7	2.2e-16	136	185	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++ rW+++I+d + k+++lg f+ta Aa+a+++a+ k++g OWM82371.1 136 SQYRGVTFYRRTSRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 185 78*****************......55**********************998 PP
2	AP2	42.3	1.9e-13	228	278	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+t+ eAa+a+++a+ k +g OWM82371.1 228 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDTEMEAARAYDKAAIKCNG 278 89******.7**5553..2.26******77********99776 PP

Sequence ? help Back to Top
Protein Sequence Length: 409 aa Download sequence
MLDLNLCLTD FAPADHAVES SGSFNSSSSP LVDEDASSHS NSLFGGSFSI GKNGRDGALD 60 ADDSGNGCCD RTIRLFPMEG GFGDGENSDT EPRRRRLVSA DHEDSAKQRI GAPLQQQQQQ 120 RSLVKKSRRG PRSRSSQYRG VTFYRRTSRW ESHIWDCGKQ VYLGGFDTAH AAARAYDRAA 180 IKFRGLDADI NFNVSDYDED IKQMGNFTKE EFVHILRRQS TGFSRGSSKY RGVTLHKCGR 240 WEARMGQFLG KKYIYLGLFD TEMEAARAYD KAAIKCNGRE AITNFEISNY EDEEIGETIN 300 GGERSLNLNL GIAPPPDDRD NYTSSYFQLQ WDDDMPRDIR HSSENFNCSA TQGAQPLYGP 360 AMGKAIEKRM EVPYGGKNPM PFFSTAASSG FSSSVAAMPS AAASNYYFP

Sequence ? help Back to Top

Protein Sequence Length: 409 aa Download sequence

MLDLNLCLTD FAPADHAVES SGSFNSSSSP LVDEDASSHS NSLFGGSFSI GKNGRDGALD  60
ADDSGNGCCD RTIRLFPMEG GFGDGENSDT EPRRRRLVSA DHEDSAKQRI GAPLQQQQQQ  120
RSLVKKSRRG PRSRSSQYRG VTFYRRTSRW ESHIWDCGKQ VYLGGFDTAH AAARAYDRAA  180
IKFRGLDADI NFNVSDYDED IKQMGNFTKE EFVHILRRQS TGFSRGSSKY RGVTLHKCGR  240
WEARMGQFLG KKYIYLGLFD TEMEAARAYD KAAIKCNGRE AITNFEISNY EDEEIGETIN  300
GGERSLNLNL GIAPPPDDRD NYTSSYFQLQ WDDDMPRDIR HSSENFNCSA TQGAQPLYGP  360
AMGKAIEKRM EVPYGGKNPM PFFSTAASSG FSSSVAAMPS AAASNYYFP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.3	9e-95	AP2 family protein