PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM82163.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family AP2
Protein Properties Length: 400aa    MW: 43789.9 Da    PI: 4.8052
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM82163.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.84.7e-17174223155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  OWM82163.1 174 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 223
                 78*******************......55************************997 PP

2AP244.34.6e-14266316155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 s+y+GV+ +k  grW+A+   +     +k+++lg f+t+ eAa+a+++a+ k +g
  OWM82163.1 266 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEIEAARAYDKAAIKCNG 316
                 89********.7******5553..2.26**********99**********99776 PP

Sequence ? help Back to Top
Protein Sequence    Length: 400 aa     Download sequence    
MWDLNDSPDQ AVRDEESEDF SDRGKRVGAG GGSVSNSSSS AAAAAVNPEE LASEDEELED  60
DVEPEDDEDE DAADPGSARK RSSRIFGFSV PGDDDCPPPV TLQFFPAEGG REEDDPATVA  120
GASSSAAGGF PRAHWAGVRF CHADPTAASA SPLPSLDVSQ PMKKSRRGPR SRSSQYRGVT  180
FYRRTGRWES HIWDCGKQVY LGGFDTAHAA ARAYDRAAIK FRGVEADINF RIEDYEEDMK  240
QMSNLTKEEF VHVLRRQSTG FPRGSSKYRG VTLHKCGRWE ARMGQFLGKK YVYLGLFDTE  300
IEAARAYDKA AIKCNGKDAV TNFDPSIYDC ELNPPGSSGA MGEHNLELSL GSSASKQSST  360
NHDSRGNIPT DHHSAAAQFE AEWRNREFIP KVNIGLVDQI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36920.11e-112AP2 family protein