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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM80625.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | AP2 | ||||||||
Protein Properties | Length: 613aa MW: 66445 Da PI: 7.4848 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 39.1 | 1.8e-12 | 268 | 324 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g rk + g ++ +e+Aa+a++ a++k++g OWM80625.1 268 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqTRKGRQ-GGYDMEEKAARAYDLAALKYWG 324 78*******************77776664346655.77******************98 PP | |||||||
2 | AP2 | 45.8 | 1.5e-14 | 369 | 418 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g OWM80625.1 369 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 418 9***************988532...5************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 613 aa Download sequence |
MKSMSDNNGC GSNWLGFSLS PHMKMEAAAV TSGHPVSPSS VPTSYVLSSS PSPHQGLCSY 60 GGESISISST TSSINGGAGF HYSAAPPPLS VMPLKSDGSL CIMEALSRSH PQGIVPSAPP 120 KLEDFLTIGG AHHHHHHHHH HGYGGEREAM PLSLDTIYYP TMGDLGTDSL CLRNWVTGGG 180 REYEQSIESN GAGSAVIGCG GGELQSLSLS MSPGSQSSCV TTAPSTQQIS ASSEMVAVET 240 GKKRGLDKVG QKQTVHRKSI DTFGQRTSQY RGVTRHRWTG RYEAHLWDNS CKKEGQTRKG 300 RQGGYDMEEK AARAYDLAAL KYWGPSTHIN FPLENYQEEL EEMKNMSRQE YVAHLRRKSS 360 GFSRGASMYR GVTRHHQHGR WQARIGRVAG NKDLYLGTFS TQEEAAEAYD IAAIKFRGVN 420 AVTNFDITRY DVERIMASNT LLAGELARRN KEIEPTNIEV VADYGHGSLP RNSMEAGIQP 480 QSNNNGIGSD WKMVLYNSPQ QHQQENNCMR SSFSVAMQDL IGMESVNLGH HPTEEDHKLG 540 GHNFSNPSSL VTSLGSSREG SPERIGQGGL GFGKPPLGSK FMALPSGSVS SPWFPSAGIS 600 MSHLPMFAAW GDT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37750.1 | 1e-139 | AP2 family protein |