![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OWM78410.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
|
||||||||
Family | MIKC_MADS | ||||||||
Protein Properties | Length: 294aa MW: 33599.1 Da PI: 6.386 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 91.9 | 3.2e-29 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien rqvtfskRrng+lKKA+EL +LCdaevaviifs+tgklyeyss OWM78410.1 9 KRIENANSRQVTFSKRRNGLLKKAQELAILCDAEVAVIIFSNTGKLYEYSS 59 79***********************************************96 PP | |||||||
2 | K-box | 62.7 | 1.5e-21 | 91 | 174 | 15 | 98 |
K-box 15 eslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 ++ ++e++ +k+ i++Lq q +llG+dL+ lk+Lq Leqq++++l+++R++K++ l+eq+e+++ +e+++ en++Lr++ OWM78410.1 91 KEEEREAEEVKEAISQLQLRQLRLLGKDLTGVGLKDLQILEQQINDGLSSVRERKEQWLMEQLEKSRLQEQRAMLENETLRRQA 174 56789****************************************************************************985 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 294 aa Download sequence |
MGRGKIEIKR IENANSRQVT FSKRRNGLLK KAQELAILCD AEVAVIIFSN TGKLYEYSSS 60 GMKQTLSRYS KCMESSESTV VQYKPEILPE KEEEREAEEV KEAISQLQLR QLRLLGKDLT 120 GVGLKDLQIL EQQINDGLSS VRERKEQWLM EQLEKSRLQE QRAMLENETL RRQANIYSPD 180 KHIFSMLTSF LKKPSVSSLM ISIVFFSALS SQIEEFRGFL PCTDLIDCHR NEQKSTFFAS 240 HVDPATLEEA RDHSLENEDS DTALHLGLPN EIYRKRKVPE SESGSSSASR FGLQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G13790.1 | 8e-62 | MIKC_MADS family protein |