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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM76224.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 199aa MW: 22765 Da PI: 9.576 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 93.7 | 8.2e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krie+ snrqvtfskRrng++KKA ELSvLCd++va+++fsstgklye++s OWM76224.1 9 KRIEDRSNRQVTFSKRRNGLIKKARELSVLCDVDVALLVFSSTGKLYEFCS 59 79***********************************************96 PP | |||||||
2 | K-box | 39.7 | 2.1e-14 | 99 | 169 | 26 | 98 |
K-box 26 keienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 + +e Lq q h+ G d+e+L++ +L qLe+qL+ ++++ R +K +l+ ++ k +el++en+ L++++ OWM76224.1 99 SHMELLQLAQSHMGGMDIEQLNMVDLVQLEKQLDAAMTQTRFRKIQLMEQSATPFYK--QELRQENRLLEEQV 169 67899*******************************************999887766..56888888888776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 199 aa Download sequence |
MGRRKLEMKR IEDRSNRQVT FSKRRNGLIK KARELSVLCD VDVALLVFSS TGKLYEFCSS 60 GSSLANILER YRKHLEEADA SDAITNPRNC SLGDAWQRSH MELLQLAQSH MGGMDIEQLN 120 MVDLVQLEKQ LDAAMTQTRF RKIQLMEQSA TPFYKQELRQ ENRLLEEQVN SLASGSGRGS 180 VSGQHQPHQL ATLRWMNKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G10140.2 | 2e-43 | MIKC_MADS family protein |