PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM76224.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family MIKC_MADS
Protein Properties Length: 199aa    MW: 22765 Da    PI: 9.576
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM76224.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF93.78.2e-30959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                krie+ snrqvtfskRrng++KKA ELSvLCd++va+++fsstgklye++s
  OWM76224.1  9 KRIEDRSNRQVTFSKRRNGLIKKARELSVLCDVDVALLVFSSTGKLYEFCS 59
                79***********************************************96 PP

2K-box39.72.1e-14991692698
       K-box  26 keienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                 + +e Lq  q h+ G d+e+L++ +L qLe+qL+ ++++ R +K +l+ ++     k  +el++en+ L++++
  OWM76224.1  99 SHMELLQLAQSHMGGMDIEQLNMVDLVQLEKQLDAAMTQTRFRKIQLMEQSATPFYK--QELRQENRLLEEQV 169
                 67899*******************************************999887766..56888888888776 PP

Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MGRRKLEMKR IEDRSNRQVT FSKRRNGLIK KARELSVLCD VDVALLVFSS TGKLYEFCSS  60
GSSLANILER YRKHLEEADA SDAITNPRNC SLGDAWQRSH MELLQLAQSH MGGMDIEQLN  120
MVDLVQLEKQ LDAAMTQTRF RKIQLMEQSA TPFYKQELRQ ENRLLEEQVN SLASGSGRGS  180
VSGQHQPHQL ATLRWMNKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10140.22e-43MIKC_MADS family protein