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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM75653.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 221aa MW: 25838.4 Da PI: 9.457 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 96.7 | 1e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien + rqvtfskRrng+lKKA+ELSvLCdaevaviifs++g+lye++s OWM75653.1 9 KRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRLYEFAS 59 79***********************************************86 PP | |||||||
2 | K-box | 65.8 | 1.5e-22 | 84 | 172 | 11 | 99 |
K-box 11 eakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 e + +l++e a ++++ie L+ +qR+llG++L+s+s++eL+++ +qLe+sl+++R++K +l+ eq ++l kek l een +L++k OWM75653.1 84 EYQVLHLKHETAEMERKIEILEVSQRKLLGQGLGSCSMEELHEMDSQLERSLSSVRARKAQLFNEQKRQLEAKEKLLLEENARLHAKCS 172 45566899*****************************************************************************9976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 221 aa Download sequence |
MVRGKIQMKR IENATSRQVT FSKRRNGLLK KAYELSVLCD AEVAVIIFSQ KGRLYEFASS 60 DIRETIERYS RYAKDVQTYK RDMEYQVLHL KHETAEMERK IEILEVSQRK LLGQGLGSCS 120 MEELHEMDSQ LERSLSSVRA RKAQLFNEQK RQLEAKEKLL LEENARLHAK CSENHRETRS 180 ASQERGAIYR LSSNGPYGLD VETELFIGLP EMRYSKQQQQ Q |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62165.3 | 1e-74 | MIKC_MADS family protein |