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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM75023.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 151aa MW: 17911.5 Da PI: 7.6702 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 48.7 | 9.4e-16 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 +ien +nrq tf+ R+ g+ AeELSv +a+v+++++sst+k++ey+s OWM75023.1 10 PIENMTNRQLTFASRLCGLRERAEELSVVFGAKVLMLMISSTNKFHEYIS 59 79**********************************************86 PP | |||||||
2 | K-box | 49.6 | 1.8e-17 | 71 | 146 | 1 | 75 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLq.reqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellle 75 yq+++g +l+++++e ++ +l+k k+e++ L + ++++Ge+L+++ keL+ Leq+++ +l+ iR++K + ++ OWM75023.1 71 YQRRRGLDLWSSHYEAMEDNLRKAKEENRDLYlEISKRRMGEGLNDMIEKELRDLEQEMQLALTAIRERKVRTVTL 146 67888899***********************97666899*******************************987765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 151 aa Download sequence |
MARGKTKIQP IENMTNRQLT FASRLCGLRE RAEELSVVFG AKVLMLMISS TNKFHEYISP 60 DTSTEEMIDE YQRRRGLDLW SSHYEAMEDN LRKAKEENRD LYLEISKRRM GEGLNDMIEK 120 ELRDLEQEMQ LALTAIRERK VRTVTLHRHT Y |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54340.1 | 2e-41 | MIKC_MADS family protein |