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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM72613.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | AP2 | ||||||||
Protein Properties | Length: 533aa MW: 59353 Da PI: 4.9085 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 33.5 | 1.1e-10 | 61 | 118 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpse.ng.kr.krfslgkfgtaeeAakaaiaarkkleg 55 s ++GV++++++g+++A+++d ++ ++ + k+ + g ++t+e Aa+ ++ a++kl+g OWM72613.1 61 SVFRGVTRHRWTGKFEAHLWDKKSsRKnIEaKKGRQGAYDTEEAAARIYDLAALKLWG 118 689******************555466655777777*******************987 PP | |||||||
2 | AP2 | 54.3 | 3.3e-17 | 161 | 212 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++++grW+A+Ir ++ k+ +lg++ t eeAa+a++ a+++l+g OWM72613.1 161 SKYRGVARHHYNGRWEARIRKD---NVDKYLYLGTYETQEEAAEAYDLAALQLKG 212 89****************9993...345************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 533 aa Download sequence |
MKGPKVSLSS SSSDSPYFGS DSIGHSDQSD KPKKKISRAD EKSDKIHQNA DSSGINGKRS 60 SVFRGVTRHR WTGKFEAHLW DKKSSRKNIE AKKGRQGAYD TEEAAARIYD LAALKLWGLD 120 TPLNFPRDEY RKEIEEMQNT TKEEYIATLR RRSKGFSRGS SKYRGVARHH YNGRWEARIR 180 KDNVDKYLYL GTYETQEEAA EAYDLAALQL KGPNAVTNFD KSLYTGRLKN NELLGFHQPQ 240 LGEVDAGQPS PPQPQSGIHG QEAAAANPRY VQPLLLPPPF EQMAVAEDIL IQLSPPLASS 300 FPQEVAIAGS LLQLIGGEPP LLSTPPECQL FQACNMDHVL SCHSEMSLEA MPQIPPLQSY 360 CLGQVLTSTG FQPIDETTLM LQTQLQQNHP HQGPGTSCEQ IDQSPSPALG FNIADKSWLD 420 SFLLPNQNFC TEYVVLANFP CLDPQSIGIS SPAGYDDDYY PLSDLFKDSR LEENSIDWIF 480 ESNENQNRTS FPTRNDGDSG YDEKMAVLPK DDASSPSGCA FCDDVLNFHE TEE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54320.1 | 3e-60 | AP2 family protein |