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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM72298.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | AP2 | ||||||||
Protein Properties | Length: 719aa MW: 78128.2 Da PI: 6.5939 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 46.6 | 8.3e-15 | 372 | 423 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g OWM72298.1 372 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 423 57****************988532...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 719 aa Download sequence |
MEAMNKWLAF SLSGGGHRHP ELQPSAATDP AISTSDWSMN GEGEDVNCRR TQYSSASPSS 60 GDQLSMLMRG HAAAGSSSCN GDRNSNIIRE HYEQLEAPKL ENFLGQHSFT QCNPYAAACT 120 DQDTSHRGYL APYNPGNNHH NSCSTSGDAM ADTNSCSLGG NHPNNGSSSI GLSMIKSWLR 180 NQPLAPAAPP THDDNRQQLI IEHSNGNSAQ NNNLSLSMSG ETDSQSQSSS GTPLPLLTPT 240 VSRGAATPLP SDHGHDNSDS NKNDKLQPDS EPMEVVPRRS LDTFGQRTSI YRGVTRPIDL 300 IYAHSCIGGY DKEEKAARAY DLAALKYWGT NTTTNFPISN YEKELEEMKH MTRQEFVASL 360 RRKSSGFSRG ASIYRGVTRH HQHGRWQARI GRVAGNKDLY LGTFSTQEEA AEAYDIAAIK 420 FRGLDAVTNF DMSRYDVKSI LESTSLPIGA AKRLKDVSDH PRHVHQAIST DILQGNGSHE 480 NNPSSAAAMM LNGINSYSHA GGWPSMARAG LSYQQAPLGG NFLLYGHGQS MQRIWGCKQE 540 QQDQEAGDNS SSDHRHHHIY NSGISGTTHN FFQPLASGSN SIMLPHDYLT NSAAVSNPDF 600 QVLSTAYASN ATAYGSVPDH HHDREGSDTH RSIMYASVTP DHDPAYSSYQ VAAVARSLYQ 660 SQQHSSDEPS SNNYTSWVPT AIPTVSSSSL NTSARSSPAS NVNVSLHCHD APAFTVWPE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51190.1 | 3e-95 | AP2 family protein |