PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM72298.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family AP2
Protein Properties Length: 719aa    MW: 78128.2 Da    PI: 6.5939
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM72298.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP246.68.3e-15372423155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 s y+GV+++++ grW A+I  +     +k  +lg+f t eeAa+a++ a+ k++g
  OWM72298.1 372 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 423
                 57****************988532...5************************998 PP

Sequence ? help Back to Top
Protein Sequence    Length: 719 aa     Download sequence    
MEAMNKWLAF SLSGGGHRHP ELQPSAATDP AISTSDWSMN GEGEDVNCRR TQYSSASPSS  60
GDQLSMLMRG HAAAGSSSCN GDRNSNIIRE HYEQLEAPKL ENFLGQHSFT QCNPYAAACT  120
DQDTSHRGYL APYNPGNNHH NSCSTSGDAM ADTNSCSLGG NHPNNGSSSI GLSMIKSWLR  180
NQPLAPAAPP THDDNRQQLI IEHSNGNSAQ NNNLSLSMSG ETDSQSQSSS GTPLPLLTPT  240
VSRGAATPLP SDHGHDNSDS NKNDKLQPDS EPMEVVPRRS LDTFGQRTSI YRGVTRPIDL  300
IYAHSCIGGY DKEEKAARAY DLAALKYWGT NTTTNFPISN YEKELEEMKH MTRQEFVASL  360
RRKSSGFSRG ASIYRGVTRH HQHGRWQARI GRVAGNKDLY LGTFSTQEEA AEAYDIAAIK  420
FRGLDAVTNF DMSRYDVKSI LESTSLPIGA AKRLKDVSDH PRHVHQAIST DILQGNGSHE  480
NNPSSAAAMM LNGINSYSHA GGWPSMARAG LSYQQAPLGG NFLLYGHGQS MQRIWGCKQE  540
QQDQEAGDNS SSDHRHHHIY NSGISGTTHN FFQPLASGSN SIMLPHDYLT NSAAVSNPDF  600
QVLSTAYASN ATAYGSVPDH HHDREGSDTH RSIMYASVTP DHDPAYSSYQ VAAVARSLYQ  660
SQQHSSDEPS SNNYTSWVPT AIPTVSSSSL NTSARSSPAS NVNVSLHCHD APAFTVWPE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51190.13e-95AP2 family protein