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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM71967.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 192aa MW: 21771.8 Da PI: 10.2391 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 96.9 | 8.3e-31 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rien++ rqvtfskRrng+lKKA+ELSvLCdaeva+iifss+gklye+ss OWM71967.1 10 RIENDTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSSRGKLYEFSS 59 8***********************************************96 PP | |||||||
2 | K-box | 57.8 | 4.7e-20 | 79 | 142 | 6 | 69 |
K-box 6 gksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskK 69 +++ +e + ++++ + + L+k++e L+ ++R+llG++Les+s++eLqqLe+qLeks ++iR++K OWM71967.1 79 NNRSSEDNLQHMSSNTSDLEKKLELLEASKRRLLGDGLESCSIEELQQLENQLEKSFSRIRARK 142 45589999*******************************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence |
MVRGKTQMRR IENDTSRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFSS RGKLYEFSSA 60 GLSKTIERYE RRSKDLEANN RSSEDNLQHM SSNTSDLEKK LELLEASKRR LLGDGLESCS 120 IEELQQLENQ LEKSFSRIRA RKLGRSGSLN PTLRQSPSTT RTREVLLLCA GGMDVETELF 180 IGPPHKGRPP QN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G22950.1 | 4e-51 | MIKC_MADS family protein |