PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM71967.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family MIKC_MADS
Protein Properties Length: 192aa    MW: 21771.8 Da    PI: 10.2391
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM71967.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF96.98.3e-311059251
                ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                rien++ rqvtfskRrng+lKKA+ELSvLCdaeva+iifss+gklye+ss
  OWM71967.1 10 RIENDTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSSRGKLYEFSS 59
                8***********************************************96 PP

2K-box57.84.7e-2079142669
       K-box   6 gksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskK 69 
                 +++ +e + ++++ + + L+k++e L+ ++R+llG++Les+s++eLqqLe+qLeks ++iR++K
  OWM71967.1  79 NNRSSEDNLQHMSSNTSDLEKKLELLEASKRRLLGDGLESCSIEELQQLENQLEKSFSRIRARK 142
                 45589999*******************************************************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MVRGKTQMRR IENDTSRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFSS RGKLYEFSSA  60
GLSKTIERYE RRSKDLEANN RSSEDNLQHM SSNTSDLEKK LELLEASKRR LLGDGLESCS  120
IEELQQLENQ LEKSFSRIRA RKLGRSGSLN PTLRQSPSTT RTREVLLLCA GGMDVETELF  180
IGPPHKGRPP QN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G22950.14e-51MIKC_MADS family protein