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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM70146.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | AP2 | ||||||||
Protein Properties | Length: 490aa MW: 53109.7 Da PI: 5.6356 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.5 | 2.8e-17 | 178 | 227 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta+ Aa+a+++a+ k++g OWM70146.1 178 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAYAAARAYDRAAIKFRG 227 78*******************......55************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 490 aa Download sequence |
MLDLNVEIIS RDSSSCCDNQ VLVMAVKEEE EELIGGKGRD QEDEEEEEHS AGTSESSSVV 60 NADESPANAG DENSSSGAVG RFIFDVFKKE EDESYPSELL TRQLFPAPGG GPEEPGFGPL 120 PAAADTPPRP QWLNLSFGSG GSGGQPGGPL LAGELRNFQP QRQQQVRKSR RGPRSRSSQY 180 RGVTFYRRTG RWESHIWDCG KQVYLGGFDT AYAAARAYDR AAIKFRGVDA DINFSISDYE 240 QDMKQMGNLT KEEFVHILRR QSTGVSRGSS KYRGMALQKC GRPHDKVIIQ YNGGEGVNNL 300 DHGGDEHEII MDATGEGSGG HNLDLNLGMA LPSSDSKKVK VGGNYRVNYI DSEAPSLEIP 360 TVDCSNTVSA PNKHLPSWPA MYPFLLPSSE GKAMEKRRAE APASPNIGWQ IPINGNFGGT 420 SAGPLMPLMF TSSNAASSGF SSPSSSNSSS THHHLHKLPA APQNPNPQLL IKPGSNINNN 480 NPFPFFTFRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28550.1 | 3e-60 | AP2 family protein |