PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM70146.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family AP2
Protein Properties Length: 490aa    MW: 53109.7 Da    PI: 5.6356
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM70146.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.52.8e-17178227155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 s+y+GV++++++grW+++I+d      + k+++lg f+ta+ Aa+a+++a+ k++g
  OWM70146.1 178 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAYAAARAYDRAAIKFRG 227
                 78*******************......55************************997 PP

Sequence ? help Back to Top
Protein Sequence    Length: 490 aa     Download sequence    
MLDLNVEIIS RDSSSCCDNQ VLVMAVKEEE EELIGGKGRD QEDEEEEEHS AGTSESSSVV  60
NADESPANAG DENSSSGAVG RFIFDVFKKE EDESYPSELL TRQLFPAPGG GPEEPGFGPL  120
PAAADTPPRP QWLNLSFGSG GSGGQPGGPL LAGELRNFQP QRQQQVRKSR RGPRSRSSQY  180
RGVTFYRRTG RWESHIWDCG KQVYLGGFDT AYAAARAYDR AAIKFRGVDA DINFSISDYE  240
QDMKQMGNLT KEEFVHILRR QSTGVSRGSS KYRGMALQKC GRPHDKVIIQ YNGGEGVNNL  300
DHGGDEHEII MDATGEGSGG HNLDLNLGMA LPSSDSKKVK VGGNYRVNYI DSEAPSLEIP  360
TVDCSNTVSA PNKHLPSWPA MYPFLLPSSE GKAMEKRRAE APASPNIGWQ IPINGNFGGT  420
SAGPLMPLMF TSSNAASSGF SSPSSSNSSS THHHLHKLPA APQNPNPQLL IKPGSNINNN  480
NPFPFFTFRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.13e-60AP2 family protein