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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM69546.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | AP2 | ||||||||
Protein Properties | Length: 362aa MW: 40331.3 Da PI: 8.0761 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 38.4 | 3.2e-12 | 61 | 116 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 ++GV++++++gr++A+++d ++n ++k+ + g ++ +e Aa a++ a++k++g OWM69546.1 61 IHRGVTRHRWTGRYEAHLWDkNCWNEsQNKKGRQGAYDDEEAAAHAYDLAALKYWG 116 68******************99998898888888********************98 PP | |||||||
2 | AP2 | 51.2 | 3.1e-16 | 159 | 210 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g OWM69546.1 159 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAATAYDMAAIEYRG 210 89****99**********99966...3.6*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 362 aa Download sequence |
MAKTSQQNYH SKNRQAPSSK DGHGNGNGND SGSGGVKPAV TKVKRTRKSV PRESPLQRSS 60 IHRGVTRHRW TGRYEAHLWD KNCWNESQNK KGRQGAYDDE EAAAHAYDLA ALKYWGPETI 120 LNFPLSTYQE ELTEMEGQSR EEYIGSLRRK SSGFSRGVSK YRGVARHHHN GRWEARIGRV 180 FGNKYLYLGT YATQEEAATA YDMAAIEYRG LNAVTNFDLS RYIKWLRPSN QSINPNFSQA 240 SPNSEAGALP NPIPELGFSL LTSAYQQNGE NKAPTSRPDG SASSALGLLL QSTKFKEMLE 300 RTSAQDSPST PPESDLPRRS FPDDIQTYFD CQESSGFGEG DDSIFGDLNS FASPMFNCEL 360 ES |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G16060.1 | 1e-107 | AP2 family protein |