PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM69207.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

AP2

Protein Properties

Length: 549aa MW: 59700.2 Da PI: 6.4602

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM69207.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	35.6	2.3e-11	170	226	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + ++ k + g ++ +e+Aa+a++ a++k++g OWM69207.1 170 SIYRGVTRHRWTGRYEAHLWDnSCR-RegQSrKGRQ-GGYDKEEKAARAYDLAALKYWG 226 57*****************5444.2455536655.779999************98 PP
2	AP2	47.7	3.9e-15	271	320	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t+eeAa+a++ a+ k++g OWM69207.1 271 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTEEEAAEAYDIAAIKFRG 320 9*************988532...5***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 549 aa Download sequence
MGSVNSNNWL SFPLSPNQSS LQANLQASQS HQFSLGLVNE PMDSPFQTQE WNLMAAHGGG 60 EVPKVADFLG VTKSAENQSS DLVALNDIQT NDSDYMFSNS SLVPVQSSIV ATSSNYEYPE 120 NVGNLQSLTL SMGSGSKGSA CETSGDNTNS PNTAENAPRR TLDTFGQRTS IYRGVTRHRW 180 TGRYEAHLWD NSCRREGQSR KGRQGGYDKE EKAARAYDLA ALKYWGTSTT TNFPISNYEK 240 ELEEMKHMTR QEFVASIRRK SSGFSRGASM YRGVTRHHQH GRWQARIGRV AGNKDLYLGT 300 FSTEEEAAEA YDIAAIKFRG PSAVTNFDMN RYDVKAILES NTLPIGGGAA KRLKEAQAIE 360 SSRQREEMMA LSSSFGYGSG TGSGARLHHQ AYPLLHQSYE SPQPLLTLQN PEITQYTSQQ 420 DPNSFHIHSG TAYNLNYPSS QSQYYSSYIQ SNPAIYHGLM SHVGSSSVMD TNNTGSSSGS 480 YSGGGGGSGG GYFGGGLGLA PNTGPGNGEE QLPMVKVDYD MQQPAGGYGS WSTDSVQGSN 540 TGVFTMWND

Sequence ? help Back to Top

Protein Sequence Length: 549 aa Download sequence

MGSVNSNNWL SFPLSPNQSS LQANLQASQS HQFSLGLVNE PMDSPFQTQE WNLMAAHGGG  60
EVPKVADFLG VTKSAENQSS DLVALNDIQT NDSDYMFSNS SLVPVQSSIV ATSSNYEYPE  120
NVGNLQSLTL SMGSGSKGSA CETSGDNTNS PNTAENAPRR TLDTFGQRTS IYRGVTRHRW  180
TGRYEAHLWD NSCRREGQSR KGRQGGYDKE EKAARAYDLA ALKYWGTSTT TNFPISNYEK  240
ELEEMKHMTR QEFVASIRRK SSGFSRGASM YRGVTRHHQH GRWQARIGRV AGNKDLYLGT  300
FSTEEEAAEA YDIAAIKFRG PSAVTNFDMN RYDVKAILES NTLPIGGGAA KRLKEAQAIE  360
SSRQREEMMA LSSSFGYGSG TGSGARLHHQ AYPLLHQSYE SPQPLLTLQN PEITQYTSQQ  420
DPNSFHIHSG TAYNLNYPSS QSQYYSSYIQ SNPAIYHGLM SHVGSSSVMD TNNTGSSSGS  480
YSGGGGGSGG GYFGGGLGLA PNTGPGNGEE QLPMVKVDYD MQQPAGGYGS WSTDSVQGSN  540
TGVFTMWND

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51190.1	0.0	AP2 family protein