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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM68859.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | AP2 | ||||||||
Protein Properties | Length: 298aa MW: 32772.5 Da PI: 5.6706 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 23 | 2e-07 | 124 | 153 | 28 | 55 |
AP2 28 r..krfslgkfgtaeeAakaaiaarkkleg 55 ++++lg f+t eAa+a+++a+ k++g OWM68859.1 124 AaaRYIYLGVFDTDIEAARAYDEAAIKYNG 153 2359***********************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 298 aa Download sequence |
MLDLNLNLNS ELPSAESSQE NNSVAVLPEA SLTQLDESVE TSNSSIVNAF WXXXXXXXXX 60 XXXTRSLPVP TCTPSISTSS RSEGWENAAV RKLRQRSSSF RREQWEKTAK IARGGSGGFD 120 TAHAAARYIY LGVFDTDIEA ARAYDEAAIK YNGREAVTNF VRSSYYGEII TEANHQGGDH 180 NLDLNLGISP PSLGKCLNEV DTSLQCHTEI SSMHDGRDLR VENPVAAAWN SPAILPRMGR 240 AKEQRIEFGR LCFPGWASHC QGKVGMAVTV FGVDRISTFN TGIWEKGGSE TYRASFIC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28550.3 | 4e-19 | AP2 family protein |