![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OWM67949.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
|
||||||||
Family | AP2 | ||||||||
Protein Properties | Length: 495aa MW: 53647.5 Da PI: 7.583 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.4 | 6.3e-17 | 146 | 195 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g OWM67949.1 146 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 195 78*******************......55************************997 PP | |||||||
2 | AP2 | 40.9 | 5e-13 | 238 | 288 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+++ eAa+a+++a+ + +g OWM67949.1 238 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDSEVEAARAYDKAAIRCNG 288 89********.7******5553..2.26**********99**********98766 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 495 aa Download sequence |
MLDLNLNVLS VAESAHEESS AVLLERLSEG SAIQMDESGT SNSSVVNADA GDDDSSSTRA 60 TSGGADACTL SFGILKVHGV GNDAAKTKEF FPLRGVVAES SSTEKWIGLS FDGGNFNTNR 120 ESEVRVMQQP SQPPKKSRRG PRSRSSQYRG VTFYRRTGRW ESHIWDCGKQ VYLGGFDTAH 180 AAARAYDRAA IKFRGVEADI NFNLSDYEED LKQMKNLTKE EFVHILRRQS TGFSRGSSKY 240 RGVTLHKCGR WEARMGQFLG KKYIYLGLFD SEVEAARAYD KAAIRCNGRE AVTNFEPSSY 300 EGEMVPGSSC EGGDPNLDLN LGISPPSFGN ALNKVEGRAS FQAEHYSALY GRNSRMENAA 360 AASLGGPPFQ GLVMMQGHTS SWNGCASFFP AEDRAKGQRI EQNPSVGLHD WAWQVNGSVC 420 AAPTRPLLQV SAAASSGFSF SVTPRATALL PPPLSLSSNP TPHNLCFSSS YSPSGSAPSS 480 NPFYHHHPQA KQPPP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G28550.3 | 1e-116 | AP2 family protein |