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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM67713.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 239aa MW: 27061.1 Da PI: 7.1329 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 88.9 | 2.6e-28 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 +i+n + rqvtfskRr g++KKA+ELSvLCdaevaviifs tgkl+e+s+ OWM67713.1 10 KIDNVTARQVTFSKRRRGLFKKASELSVLCDAEVAVIIFSATGKLFEFSN 59 69**********************************************95 PP | |||||||
2 | K-box | 45.3 | 3.8e-16 | 95 | 171 | 23 | 99 |
K-box 23 kLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 +L ke+ + +++R++ GedL+ L+l+eL+qLe+ Le +l ++ ++K+e ++++i el kk +l eenk L++++e OWM67713.1 95 RLSKEVAEKTHQLRQMRGEDLQGLNLEELKQLEKMLEAGLHRVLQTKEERIMTEIAELEKKGAKLIEENKVLKHQVE 171 5667777777899************************************************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence |
MAREKIKIRK IDNVTARQVT FSKRRRGLFK KASELSVLCD AEVAVIIFSA TGKLFEFSNS 60 SMMDTLERYR IHHYNIEHME TPMLELQLEN SNNIRLSKEV AEKTHQLRQM RGEDLQGLNL 120 EELKQLEKML EAGLHRVLQT KEERIMTEIA ELEKKGAKLI EENKVLKHQV ELYSKGKKPV 180 LVESDTAGAP EEGVLSSAES ATNVCSCSSG PPPDDEGSDI SLKLGYVFSS KIIERKQSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 3e-76 | MIKC_MADS family protein |