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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM67523.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 214aa MW: 24079.7 Da PI: 8.9506 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 78.3 | 5.3e-25 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 k+ien rqvtf+kRr+g+lKKA+ELSvLCda++ v+ifs +gk+ye + OWM67523.1 9 KKIENPVHRQVTFCKRRAGLLKKAKELSVLCDADIGVLIFSAHGKVYELA 58 68*********************************************965 PP | |||||||
2 | K-box | 66.1 | 1.3e-22 | 92 | 183 | 9 | 100 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ++ a ++ + e++ Lk+eie Lq+ +R + G + + +sl eL Le++Le + +iRs+K+++++++i+ l++ke l+ +nk+L+ k+ee OWM67523.1 92 QQRAPSSDAKDEINLLKQEIEVLQKGLRYMFGAGAGAMSLDELDVLEKHLEIWIYHIRSTKMDIMFQEIQLLRNKEGILKAANKYLQDKIEE 183 55566678899******************************************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence |
MARGKVQMKK IENPVHRQVT FCKRRAGLLK KAKELSVLCD ADIGVLIFSA HGKVYELATK 60 GTMQGLIDRY MNSSLSGQGA AQSSSSDHVA SQQRAPSSDA KDEINLLKQE IEVLQKGLRY 120 MFGAGAGAMS LDELDVLEKH LEIWIYHIRS TKMDIMFQEI QLLRNKEGIL KAANKYLQDK 180 IEENAAATNF PPMTTNYTNY TYPLTAIQNE LFQY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71692.1 | 3e-79 | MIKC_MADS family protein |