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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM66208.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 223aa MW: 25278.6 Da PI: 5.5151 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 83.5 | 1.3e-26 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n s rqvtfskRr g+lKKAeELSvLCda+v +iifss+ kl+eyss OWM66208.1 9 KKIDNASARQVTFSKRRRGLLKKAEELSVLCDADVGLIIFSSSRKLFEYSS 59 68***********************************************96 PP | |||||||
2 | K-box | 57.2 | 7.4e-20 | 91 | 172 | 18 | 99 |
K-box 18 qqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 + ++a+L ke+++ +++R++ Ge+L+ Ls++eLqqLe+ Le +l +i +kK e ++++i elq+k +l een++Lr++++ OWM66208.1 91 NSNYARLSKEVSEKSHQLRQMRGEELQGLSIEELQQLEKSLEAGLGRIIEKKGECIMKEITELQEKGMQLGEENERLRQQVM 172 56899***************************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence |
MAREKIQIKK IDNASARQVT FSKRRRGLLK KAEELSVLCD ADVGLIIFSS SRKLFEYSSS 60 SMKDIIDRHR LHSKNLEKLE QPSLELQLVE NSNYARLSKE VSEKSHQLRQ MRGEELQGLS 120 IEELQQLEKS LEAGLGRIIE KKGECIMKEI TELQEKGMQL GEENERLRQQ VMDISNGRRL 180 VTADSDNLVN YEEGLSSESV TNGCNSTGPP MDYESSDTSL KLG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 1e-110 | MIKC_MADS family protein |