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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM65853.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | AP2 | ||||||||
Protein Properties | Length: 331aa MW: 37293.3 Da PI: 6.7979 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 26.8 | 1.3e-08 | 61 | 115 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+ +++gr++A+++d ++n ++k+ + g ++ ++ Aa a++ a++k++g OWM65853.1 61 SIYRGVT--RWTGRYEAHLWDkNCWNEsQNKKGRQGAYDDEDVAAHAYDLAALKYWG 115 579***7..48**********99998898888888*****99************987 PP | |||||||
2 | AP2 | 38.7 | 2.4e-12 | 143 | 185 | 10 | 55 |
AP2 10 kkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g OWM65853.1 143 HHNGRWEARIGRvF---G-NKYLYLGTYATQEEAAIAYDMAAIEYRG 185 569******99966...3.6*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 331 aa Download sequence |
MVKLLQPQNP RNRRTTNNNS SNGNSQGNNN AAITTVNNGD IVKGKRKRRS VPRDSPPQRS 60 SIYRGVTRWT GRYEAHLWDK NCWNESQNKK GRQGAYDDED VAAHAYDLAA LKYWGIDTIL 120 NFPLLTYQKE LKEMEGQSRE EHHHNGRWEA RIGRVFGNKY LYLGTYATQE EAAIAYDMAA 180 IEYRGLNAVT NFDLSRYIKW LKPDNSASQS QPDPNVDQNL TTAVPNHDGL SHMPVQSKHG 240 DFDDVPLHRS RPASATSALG LLLQSSKFRE MMEMTSAADG AAPSRESSAV VSKCSFPEEI 300 QTYFECQESN SLEEGDDIIF GQLNAFTPPL F |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G16060.1 | 4e-88 | AP2 family protein |