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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM65211.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 251aa MW: 28813.5 Da PI: 8.2943 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 96.1 | 1.5e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELSvLCdae+a+iifs++gkly +ss OWM65211.1 9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEIALIIFSTRGKLYQFSS 59 79***********************************************96 PP | |||||||
2 | K-box | 100.2 | 2.9e-33 | 79 | 174 | 5 | 100 |
K-box 5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 +s + ++++s++qe+ kLk+++e Lq++qR+llGedL+sLs+keL+qLe+qLe+slk+iRs+K++ + +q +lqk+e++l e+n++Lr+klee OWM65211.1 79 LESSRQITETQSSYQEYLKLKARVEDLQQTQRNLLGEDLGSLSMKELEQLERQLESSLKHIRSTKDQSMNDQFTDLQKREQMLLEANESLRRKLEE 174 4445788999***********************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence |
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEIALIIFST RGKLYQFSSS 60 SSMSKTLERY QRCSYNAQLE SSRQITETQS SYQEYLKLKA RVEDLQQTQR NLLGEDLGSL 120 SMKELEQLER QLESSLKHIR STKDQSMNDQ FTDLQKREQM LLEANESLRR KLEESCAHFP 180 FQLSWEAAGA QLNLPYGRIP APQAEANFFH PLDCNSTLQI GYNQMGSTDD QVNAASTSQT 240 VTGYIPGWMF N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G02310.1 | 4e-88 | MIKC_MADS family protein |