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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM65210.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 253aa MW: 29242.3 Da PI: 9.8781 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 94.9 | 3.7e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtfskRr g+lKKA+E+S+LCdaeva+iifs++gkl+eyss OWM65210.1 9 KRIENKINRQVTFSKRRVGLLKKAHEISILCDAEVALIIFSTKGKLFEYSS 59 79***********************************************96 PP | |||||||
2 | K-box | 102.1 | 7.6e-34 | 84 | 175 | 9 | 100 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 + ++++ ++ e+akLk+++e Lqr+qRh++GedL+sLslk+Lq+Le+qL+++lk+iR++Kn+l++e+i+elq+k k+lqe+n+ L k+++e OWM65210.1 84 NGSNETHDWHLEHAKLKARVEVLQRNQRHYKGEDLDSLSLKDLQSLEHQLDSGLKHIRTRKNQLMHESISELQRKDKALQEQNNVLLKRVKE 175 66788999******************************************************************************999886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
MGRGRVQLKR IENKINRQVT FSKRRVGLLK KAHEISILCD AEVALIIFST KGKLFEYSSD 60 SCMERILERY ERYSYAERQI LGSNGSNETH DWHLEHAKLK ARVEVLQRNQ RHYKGEDLDS 120 LSLKDLQSLE HQLDSGLKHI RTRKNQLMHE SISELQRKDK ALQEQNNVLL KRVKEKERKE 180 KEMAESQVAS LDRQHNEHSV NSAVVVLPPA SNPLSSFSPC QERLDGRLDG GKSAQLNRAA 240 SLLPPWMLRE DLN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60910.1 | 9e-86 | MIKC_MADS family protein |