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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM64979.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 165aa MW: 19240.7 Da PI: 10.0186 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 100 | 9.3e-32 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krienk+nrqvtfskRrng+lKKA+ELSvLCdae+a+iifss+gklye+ OWM64979.1 9 KRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEIALIIFSSRGKLYEFG 58 79**********************************************95 PP | |||||||
2 | K-box | 87.2 | 3.3e-29 | 91 | 162 | 13 | 84 |
K-box 13 kaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkke 84 +++s++qe++kLk + e+Lqr+qR+llGedL++L+lkeL +Le+qLe +l + R+++++l++eq+e+l+kk OWM64979.1 91 HMQSWCQEVTKLKVKFESLQRTQRQLLGEDLGPLNLKELLNLEKQLEGALAQTRQRRTQLMVEQVEDLRKKD 162 78********************************************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 165 aa Download sequence |
MGRGRVEVKR IENKINRQVT FSKRRNGLLK KAYELSVLCD AEIALIIFSS RGKLYEFGSA 60 GLMLFFTLYN VYVILCGVYS FLTHWIICIL HMQSWCQEVT KLKVKFESLQ RTQRQLLGED 120 LGPLNLKELL NLEKQLEGAL AQTRQRRTQL MVEQVEDLRK KDLTV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45650.1 | 3e-62 | MIKC_MADS family protein |