PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM64979.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family MIKC_MADS
Protein Properties Length: 165aa    MW: 19240.7 Da    PI: 10.0186
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM64979.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF1009.3e-32958150
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                krienk+nrqvtfskRrng+lKKA+ELSvLCdae+a+iifss+gklye+ 
  OWM64979.1  9 KRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEIALIIFSSRGKLYEFG 58
                79**********************************************95 PP

2K-box87.23.3e-29911621384
       K-box  13 kaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkke 84 
                 +++s++qe++kLk + e+Lqr+qR+llGedL++L+lkeL +Le+qLe +l + R+++++l++eq+e+l+kk 
  OWM64979.1  91 HMQSWCQEVTKLKVKFESLQRTQRQLLGEDLGPLNLKELLNLEKQLEGALAQTRQRRTQLMVEQVEDLRKKD 162
                 78********************************************************************96 PP

Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    
MGRGRVEVKR IENKINRQVT FSKRRNGLLK KAYELSVLCD AEIALIIFSS RGKLYEFGSA  60
GLMLFFTLYN VYVILCGVYS FLTHWIICIL HMQSWCQEVT KLKVKFESLQ RTQRQLLGED  120
LGPLNLKELL NLEKQLEGAL AQTRQRRTQL MVEQVEDLRK KDLTV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45650.13e-62MIKC_MADS family protein