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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g890350.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | Nin-like | ||||||||
Protein Properties | Length: 328aa MW: 37588.2 Da PI: 8.5759 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 85.4 | 5.2e-27 | 201 | 250 | 3 | 52 |
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ++i l+dl+kyF+lpi +A+++L+v+lTvLK++CR++GI+RWPhRkiksl Pd.00g890350.m01 201 ANIALSDLAKYFDLPIVEASRNLNVGLTVLKKKCREFGIPRWPHRKIKSL 250 79**********************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 328 aa Download sequence |
MDSSDCEPHL LRSLLVFKNT INQELIRSLH VYRLDEGKEN EVEREFVLSA SEPYVELPVD 60 PLLRLMKFPV SQVHEGHVNG CWVCIFAFQA NCPPNFTCIP SILSVSRNRK LKSIPALAND 120 LQMIFELSNK KPLQRSGEET CRGSNDNNHQ LIRSSPVLDL DLNSLPCPVP MSESSEDQEI 180 GRSLPGIMEK KKKRAPSEHV ANIALSDLAK YFDLPIVEAS RNLNVGLTVL KKKCREFGIP 240 RWPHRKIKSL DGLIRDLQEE TEIQQQENQA AALAVAKRQR MLENEKESIE RKPFLEMKTE 300 TKKFRQDVFK RRHRARLLRS QGLSNSDN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35590.1 | 1e-81 | Nin-like family protein |