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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g738770.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | Nin-like | ||||||||
Protein Properties | Length: 468aa MW: 53043.3 Da PI: 4.6653 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 83.3 | 2.3e-26 | 298 | 348 | 2 | 52 |
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 +k +s e++s+yF++pi++AAkeL+v+lT+LK++CR++GI+RWPhRk++sl Pd.00g738770.m01 298 SKMLSRETISNYFYMPITQAAKELNVGLTLLKKRCRELGIRRWPHRKLASL 348 57899*******************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 468 aa Download sequence |
MAEKTVSELA ETNSETAAAA EDMELEASEP APAEKPDEGT DGEAEAEANA KRLRDEEGSE 60 GNDAVAKKTK VEKSPEEERL EKLGEGKESG RVSLGPKSFG SSVEMFDYFY KLLHYWPTDL 120 SVNKYEHLVL LDLLKKGHAE PDKKIGGGVH AFQVRTHPLY KSSGMNGYAP FDWQYEWTLP 180 LVQDSFHDAA VPFMDQSCLN LDPLYSSLDI QPIRSVFQDD EIVLGNGNGV CNDLFSELME 240 PSNNQQKQIQ HQPPLLMCKN EENGSAENEL EEETKVISKR SHLSTRLRSS NSTSLNSSKM 300 LSRETISNYF YMPITQAAKE LNVGLTLLKK RCRELGIRRW PHRKLASLQT LIRNIQELGK 360 EGEESEEKLR NAIELLERER KLLEEVPDMQ LEDNTKRLRQ ACFKANYKKR KIMGMNNMDQ 420 SQSSFICSNN EIHEYASIMD DGYEEDEEIK SLLSDSFSSS NSNNICLF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G18790.1 | 1e-38 | Nin-like family protein |