PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g737000.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 738aa    MW: 82643.2 Da    PI: 5.2488
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g737000.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS389.44.1e-1193637331373
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       l++lL+ cA+avs++d + a++lL+++++++sp gd  qRla++f+++L+arla++++++y al++++ts    ++ l+a++++  ++P++k+
  Pd.00g737000.m01 363 LRTLLILCAQAVSADDRRTANELLKQIRQHSSPFGDGSQRLAHCFANGLEARLAGTGTQIYTALSSKRTS---AADMLKAYQTYIAACPFMKV 452
                       5789************************************************************999999...9******************* PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
                       + + aN++I + +e++e++HiiDf+i +G+QWpaL++ L+ R++gpp+lRiTg++ p+sg   +e+++etg+rLak++e+ +vpfe+++ +ak
  Pd.00g737000.m01 453 AIIFANHMISKLAEKAETLHIIDFGILYGFQWPALIHCLSRRTGGPPKLRITGIELPQSGfrPEERVQETGHRLAKYCERYNVPFEYTA-IAK 544
                       ***********************************************************9*****************************.7** PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                       ++e++++eeL+vk++E+laVn+ ++ ++llde+v+++s+rd+vL+l+++++P+++v++  + ++ ++ F++rf eal ++salfd+++++lpr
  Pd.00g737000.m01 545 KWETIQIEELKVKRNEVLAVNCLFRFKNLLDETVAVNSPRDAVLNLIRRMNPDIFVHAIINGSYHAPFFVTRFREALFHFSALFDMFDTNLPR 637
                       ********************************************************************************************* PP

              GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370
                       e+  r++ E+e+lgre+vn +aceg+er+ r et+++W+ r ++aGFk++pl+ + +++ ++ ++  + + + v+e+ +++++gWk+r ++  
  Pd.00g737000.m01 638 EDPMRSMFEEEFLGREVVNTIACEGSERVVRPETYKQWQVRNMRAGFKQLPLDRELMNKLRMKVKLGYHRDFVVDEDGNWMLQGWKGRIIYCS 730
                       ********************************************************************999********************** PP

              GRAS 371 SaW 373
                       S+W
  Pd.00g737000.m01 731 SCW 733
                       *** PP
Sequence ? help Back to Top
Protein Sequence    Length: 738 aa     Download sequence    
MDPGFSQLPS SSLSSGDQTL SPNFNEYPSS DPFVDLSFLD QNPGNSALSP SLSPEGDDSD  60
YSDSVLKYIN QVLMEEDMVT KPCMFHDPLA VQAAEKSLYE VLGEKYPPSP DQHPLNIESP  120
DCPFSVTFSD FSAINSSSSS TSHSVDSRWS NADVIENKPS ILETPIPDNF VFQSTSKPRS  180
QLSSNGNESG NGLVGSYMSE LMVSNLFSES ELVLQFNRGV EEASKFLPRG QLIVDVENNK  240
PYTVASGKAE DVVVKTEKDD IELLATSSRG KKSHEREDTD LEDGRSNKQS AVYLEDTEAE  300
LSEIFDKVLL CGGGKAEPFV CGGEEVCQDE ANKALQQNGQ SVGTGNGKTR AKKKGDKKEV  360
VDLRTLLILC AQAVSADDRR TANELLKQIR QHSSPFGDGS QRLAHCFANG LEARLAGTGT  420
QIYTALSSKR TSAADMLKAY QTYIAACPFM KVAIIFANHM ISKLAEKAET LHIIDFGILY  480
GFQWPALIHC LSRRTGGPPK LRITGIELPQ SGFRPEERVQ ETGHRLAKYC ERYNVPFEYT  540
AIAKKWETIQ IEELKVKRNE VLAVNCLFRF KNLLDETVAV NSPRDAVLNL IRRMNPDIFV  600
HAIINGSYHA PFFVTRFREA LFHFSALFDM FDTNLPREDP MRSMFEEEFL GREVVNTIAC  660
EGSERVVRPE TYKQWQVRNM RAGFKQLPLD RELMNKLRMK VKLGYHRDFV VDEDGNWMLQ  720
GWKGRIIYCS SCWVPSRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein