![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g665240.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | Nin-like | ||||||||
Protein Properties | Length: 989aa MW: 108774 Da PI: 5.184 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 91.8 | 5.2e-29 | 589 | 640 | 1 | 52 |
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+isle+l++yF++++kdAAk+Lgvc+T++KriCR++GI+RWP+Rkik++ Pd.00g665240.m01 589 AEKSISLEVLQQYFAGSLKDAAKSLGVCPTTMKRICRHHGISRWPSRKIKKV 640 589***********************************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 989 aa Download sequence |
MVEPEEESRT QAIPPKSKNT VDDREAALME FDLDLDAFWP LDPIHFPSNP TSPPLFSSTD 60 QPCSPSWGFP DGDADNDDKL AGQVDQALSD RPQFSSCIPD PGREIPRENE DRRMLTSPFL 120 GLEPVENPDA YCLIKEKITQ ALRQLKELTD QHVLAQVWAP VKNEGRYVLT TSGQPFVLDP 180 YTNGLHQYRM ASLMYMFSVD GESDGMLGLP GRVFQKKLPE WTPNVQYYSI KEYPRLGHAQ 240 HYNVQGTLAL PVFEPSGQFC VGVLELIMTS PKINYASEVN KVCKALEAVS LKSSEIHTSM 300 QIQICNEGRQ TALTEILEIL TVVCETHKLP LAQTWVPCMH RNVLAYGGGL KKSCTSFDGS 360 CMEQVCMSTT DAAFYIVDAP MWHFRAACVE HHLQKGQGVA GRAFLSRNAC FCRDITQFCK 420 TDYPLVHYAR MFKLTSCFAI CLQSTHTGND DYILEFFLPP SITDSYEQQT LLGSLLAIIK 480 NHFQSLKVAS GIILEEEGLV EMVQASTNRG LDSRLECIRI PHSAETPPGP ALPNGEEMVQ 540 LDSSKPQLMV DFDPANDGSN AVNEGGENNI SCPENKDIKK KSEKKRGKAE KSISLEVLQQ 600 YFAGSLKDAA KSLGVCPTTM KRICRHHGIS RWPSRKIKKV NHSLSKLQRV IESVQGAEGA 660 FGLTSLTASP RSGAVGSISR PYILNGFNQQ SSPSSKPSEL HGEKKDSPTP TTPGKEGQAW 720 IENQLLDGGI LSQEELLLEH GRFLLDNGKG SNTSKTGSSS GEASAGTPTS HGSCQGSPAN 780 GNALVNNPFV PSIHDLCIEV NGFPESTVRP PKEPNLSVAC SIPDTVLMTD PEEPCRGMLI 840 EDAGSSKDLK NLCPQVDAMV DEQVPEACCT NPPCSDSALK PSNTMPHIIA RQEMKSVTIK 900 ATYKEDIIRF RISMSSGIVE LKDEVAKRLK LEMGTFDIKY VDDDLEWVLV ACDADVQECM 960 EICRSLGIKM IRLSVHDIMS NFGSSCGSM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G24020.1 | 0.0 | Nin-like family protein |