PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g665240.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family Nin-like
Protein Properties Length: 989aa    MW: 108774 Da    PI: 5.184
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g665240.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK91.85.2e-29589640152
            RWP-RK   1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                       aek+isle+l++yF++++kdAAk+Lgvc+T++KriCR++GI+RWP+Rkik++
  Pd.00g665240.m01 589 AEKSISLEVLQQYFAGSLKDAAKSLGVCPTTMKRICRHHGISRWPSRKIKKV 640
                       589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 989 aa     Download sequence    
MVEPEEESRT QAIPPKSKNT VDDREAALME FDLDLDAFWP LDPIHFPSNP TSPPLFSSTD  60
QPCSPSWGFP DGDADNDDKL AGQVDQALSD RPQFSSCIPD PGREIPRENE DRRMLTSPFL  120
GLEPVENPDA YCLIKEKITQ ALRQLKELTD QHVLAQVWAP VKNEGRYVLT TSGQPFVLDP  180
YTNGLHQYRM ASLMYMFSVD GESDGMLGLP GRVFQKKLPE WTPNVQYYSI KEYPRLGHAQ  240
HYNVQGTLAL PVFEPSGQFC VGVLELIMTS PKINYASEVN KVCKALEAVS LKSSEIHTSM  300
QIQICNEGRQ TALTEILEIL TVVCETHKLP LAQTWVPCMH RNVLAYGGGL KKSCTSFDGS  360
CMEQVCMSTT DAAFYIVDAP MWHFRAACVE HHLQKGQGVA GRAFLSRNAC FCRDITQFCK  420
TDYPLVHYAR MFKLTSCFAI CLQSTHTGND DYILEFFLPP SITDSYEQQT LLGSLLAIIK  480
NHFQSLKVAS GIILEEEGLV EMVQASTNRG LDSRLECIRI PHSAETPPGP ALPNGEEMVQ  540
LDSSKPQLMV DFDPANDGSN AVNEGGENNI SCPENKDIKK KSEKKRGKAE KSISLEVLQQ  600
YFAGSLKDAA KSLGVCPTTM KRICRHHGIS RWPSRKIKKV NHSLSKLQRV IESVQGAEGA  660
FGLTSLTASP RSGAVGSISR PYILNGFNQQ SSPSSKPSEL HGEKKDSPTP TTPGKEGQAW  720
IENQLLDGGI LSQEELLLEH GRFLLDNGKG SNTSKTGSSS GEASAGTPTS HGSCQGSPAN  780
GNALVNNPFV PSIHDLCIEV NGFPESTVRP PKEPNLSVAC SIPDTVLMTD PEEPCRGMLI  840
EDAGSSKDLK NLCPQVDAMV DEQVPEACCT NPPCSDSALK PSNTMPHIIA RQEMKSVTIK  900
ATYKEDIIRF RISMSSGIVE LKDEVAKRLK LEMGTFDIKY VDDDLEWVLV ACDADVQECM  960
EICRSLGIKM IRLSVHDIMS NFGSSCGSM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24020.10.0Nin-like family protein