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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g659360.m02 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NF-YC | ||||||||
Protein Properties | Length: 770aa MW: 84008.5 Da PI: 5.6508 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 89.9 | 2.4e-28 | 457 | 522 | 38 | 101 |
NF-YC 38 misaeaPvl..lskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprdel 101 m+ + P + l++ace+fileltlrsw+h+eenkrrtl+k+diaaa+trtdifdflvdivpr++l Pd.00g659360.m02 457 MVGSPNPGIkkLTRACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDL 522 5666666554489**************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 770 aa Download sequence |
MAAVTLLALG NGAPDVFASV AAVRTGQYRT GFGAILSAGT FVSAFVVGFV AIYAAPFSLN 60 PAPFVRDVLF YLTAALFLFY VYLSAEIYLW QAVGFVGFYL FFVGLVFWMD LGLGAGGKKS 120 RVEEGVVGDS EIQRGLVAPD FEIGQVSENS EDGKPSFGFR RTLVMISKAW ELPVSVLLKL 180 TIPQAAPSEW SRFYTSANIG LCPLALLYAC NSFMPFNHPV VFLLSDTHLP LWFVVLLASS 240 PLALLHYIVE KDPPKNEQMP VLLIAFVMSV FWISTTAGEL LNCLAALGSL LELPPALLGL 300 TVLAWGNSVG DLVADVALAK AGHPAMAMAG CFAGPMFNML VGLGTALVIQ TYNVYPEVYE 360 LQFHVGIIIA FVFLLLSLMG SLLVITWCRF RNRTLPRSFC SSFLGTQLIL RSRAPPVREK 420 GQVAMDPQGH NQPQSMGMVG SGAQLTYGTN PYQHNQMVGS PNPGIKKLTR ACEMFILELT 480 LRSWNHTEEN KRRTLQKNDI AAAITRTDIF DFLVDIVPRE DLKDEVLASI PRGTVSVGGP 540 ADALPYCYMP PQHAPQVGAP GMIMVWDYYL ILSRFAGTSK TNEPDHFDPQ QPILDVKPLN 600 SMPYIGPPTM HPSTTTDSDA QEKLKPTVII LPPDSTREQW NKALETNKSG IVLTGAAARG 660 QVGPIIGLVD IGENEDSYLF RVNLPGVLRD ENFECSVDID GEVFIKGVTT TGEKTVCKNS 720 QVFKMQTQNL CPPGHFSISF QLPGPVECQK VTLSFETDGI LEAIVQKKLP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 492 | 498 | RRTLQKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08970.3 | 6e-43 | NF-YC family protein |