PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g659360.m02
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NF-YC
Protein Properties Length: 770aa    MW: 84008.5 Da    PI: 5.6508
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g659360.m02genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC89.92.4e-2845752238101
             NF-YC  38 misaeaPvl..lskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprdel 101
                       m+ +  P +  l++ace+fileltlrsw+h+eenkrrtl+k+diaaa+trtdifdflvdivpr++l
  Pd.00g659360.m02 457 MVGSPNPGIkkLTRACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDL 522
                       5666666554489**************************************************987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 770 aa     Download sequence    
MAAVTLLALG NGAPDVFASV AAVRTGQYRT GFGAILSAGT FVSAFVVGFV AIYAAPFSLN  60
PAPFVRDVLF YLTAALFLFY VYLSAEIYLW QAVGFVGFYL FFVGLVFWMD LGLGAGGKKS  120
RVEEGVVGDS EIQRGLVAPD FEIGQVSENS EDGKPSFGFR RTLVMISKAW ELPVSVLLKL  180
TIPQAAPSEW SRFYTSANIG LCPLALLYAC NSFMPFNHPV VFLLSDTHLP LWFVVLLASS  240
PLALLHYIVE KDPPKNEQMP VLLIAFVMSV FWISTTAGEL LNCLAALGSL LELPPALLGL  300
TVLAWGNSVG DLVADVALAK AGHPAMAMAG CFAGPMFNML VGLGTALVIQ TYNVYPEVYE  360
LQFHVGIIIA FVFLLLSLMG SLLVITWCRF RNRTLPRSFC SSFLGTQLIL RSRAPPVREK  420
GQVAMDPQGH NQPQSMGMVG SGAQLTYGTN PYQHNQMVGS PNPGIKKLTR ACEMFILELT  480
LRSWNHTEEN KRRTLQKNDI AAAITRTDIF DFLVDIVPRE DLKDEVLASI PRGTVSVGGP  540
ADALPYCYMP PQHAPQVGAP GMIMVWDYYL ILSRFAGTSK TNEPDHFDPQ QPILDVKPLN  600
SMPYIGPPTM HPSTTTDSDA QEKLKPTVII LPPDSTREQW NKALETNKSG IVLTGAAARG  660
QVGPIIGLVD IGENEDSYLF RVNLPGVLRD ENFECSVDID GEVFIKGVTT TGEKTVCKNS  720
QVFKMQTQNL CPPGHFSISF QLPGPVECQK VTLSFETDGI LEAIVQKKLP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1492498RRTLQKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08970.36e-43NF-YC family protein