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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g497570.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | Nin-like | ||||||||
Protein Properties | Length: 1146aa MW: 126958 Da PI: 6.3818 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 88.2 | 7e-28 | 904 | 954 | 2 | 52 |
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+isl +l++yF++++kdAAk++gvc+T+LKriCRq+GI RWP+Rki+++ Pd.00g497570.m01 904 EKTISLPVLRQYFAGSLKDAAKSIGVCPTTLKRICRQHGITRWPSRKIRKV 954 799**********************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1146 aa Download sequence |
MDYGALMSNS SSYGTLYDTT MEVDFMDEIL FEGCWLQSNA GFNLLRQQQQ LVCPPISQAL 60 TNHPSHYFPP YDHQSNSTVA HLSMSPHQQI YQEENTDGSY PESHSSFVVE GNTEAGRRLW 120 IGPRANPGPS SSVKERLMLA IGYLKECTKG RDVLIQIWVP IKRGGRQYLT THDQPFSLDP 180 NCKSLAGYRN VSKDYQFITE EDSAESVGLP SRAFLGKFLE WTPDVCFLRS YEYPRIDYAQ 240 QYDVRGSLAL PIFENGSGTC LGVVEIVMTP QKVNYRPELE YVCQALEAVD LRSSQNFWPL 300 CVKTRDELFQ AALTEIVEVL ASVCKTHRLP LAQTWAPCIQ QGKGGCRHSD ENYAHCVSTV 360 DAACFVADLD ILGFHEACSE HHLFQGQGIV GTAFTINKMC FATDIKAFSK TEYPLSHHAR 420 MFGLHAAVAI PFRSVYTGPA DLVLEFFLPK DCQDPEEQKQ MLNSLCIVIQ QACRSLHVNV 480 DKELEEEIMF PIREPVIGSD GGLHKEETQR LTSSPTEEPS GKESSWIAHM IEAQQKGKGV 540 SVSLDYQTEE PKEEFKVTTH WGNTQGSLHS GQAVDLRSSQ NFWPLCVKTR DELFQAALTE 600 IVEVLASVCK THRLPLAQTW APCIQQGKGG CRHSDENYAH CVSTVDAACF VADLDILGFH 660 EACSEHHLFQ GQGIVGTAFT INKTCFATDI KAFSKTEYPL SHHARMFGLH AAVAIPFRSV 720 YTGPADLALE FFLPKDCQDP EEQKQMLNSL CIVIQQACRS LHVNVDKELE EEIMFPIREP 780 VIGSDGGLHK EETQRLTSSP TEEPSGKESS WIAHMIEAQQ KGKGVSVSLD YQTEEPKEEF 840 KVTTHWGNTQ GSLHSGQVFS EFGQLHQSSG SHGNVEGGAD SYSFGGRGTS GGRKAGEKRR 900 TKTEKTISLP VLRQYFAGSL KDAAKSIGVC PTTLKRICRQ HGITRWPSRK IRKVGQSLKK 960 LQLVIDSVQG AEGAIHIGSF YSSFPELNSP KFPGSGQYSS MNMSDHSKQV NPQQHDQSGL 1020 YSHVTTTKSP SSSCSQTSGP SVCVAGAQQH TIPINTLGSG DALMTEDPVG MLKRACGDAD 1080 LHASFQEETK LIHRSQSHKS FSDNLSYENL PPLPGSSGRS LRDGGVYRVK ATFMDEKNKV 1140 QHATKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35270.1 | 0.0 | Nin-like family protein |