PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g404890.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WOX
Protein Properties Length: 181aa    MW: 20675.2 Da    PI: 9.4738
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g404890.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox65.47.9e-213192157
                      TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
          Homeobox  1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                      ++ R+++t+eq+++L +lF++  r+ps++++++++++l    +++ ++V++WFqN++a+e++
  Pd.00g404890.m01 31 KCGRWNPTTEQVKVLTDLFRSgLRTPSTDQIQKISSQLsfygKIESKNVFYWFQNHKARERQ 92
                      568*****************99**************************************97 PP

2Wus_type_Homeobox114.55.1e-373194265
  Wus_type_Homeobox  2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                       ++ RW+Pt+eQ+k+L++l++sGlrtP++++iq+i+++L+ yGkie+kNVfyWFQN+kaRerqk+
   Pd.00g404890.m01 31 KCGRWNPTTEQVKVLTDLFRSGLRTPSTDQIQKISSQLSFYGKIESKNVFYWFQNHKARERQKR 94
                       678***********************************************************95 PP

Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    
MDEGMSGFCI KAASFRGSGG GGSCNGNNGT KCGRWNPTTE QVKVLTDLFR SGLRTPSTDQ  60
IQKISSQLSF YGKIESKNVF YWFQNHKARE RQKRRKVSID DKDFTRRDQD KISSPKQLNQ  120
VSEPARVIET LQLFPVNSFD DSEAEKMRFH ANEYFKEATA FAYRVGTEMD HPPLDLRLSF  180
L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11260.11e-64WOX family protein