![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g1065650.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | Nin-like | ||||||||
Protein Properties | Length: 243aa MW: 28223.1 Da PI: 5.9772 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 85.9 | 3.5e-27 | 133 | 182 | 3 | 52 |
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 + ++l++++kyF+lpi++AAk+L+v+lTvLKr+CR+++I+RWPhRkiksl Pd.00g1065650.m01 133 AALELDEIQKYFDLPITQAAKKLNVGLTVLKRRCRELNIMRWPHRKIKSL 182 6899********************************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 243 aa Download sequence |
MDSIQLQVPK IEINPHGFDS LQYYQDPFHE NVSLEEHLQL DNLLEFNSIP LEWNQNQHSH 60 MGFQGFEDLG SWDFMLDNTD FTSPCDYVVV DEKPVTTVVD SFDYSNNPTS VLDEASRMAD 120 WGSNGIYNKK KSAALELDEI QKYFDLPITQ AAKKLNVGLT VLKRRCRELN IMRWPHRKIK 180 SLKALIENVK GLGLTNELKM LEEQKRLLEQ LPDMELTERA KKLRQASFKA NYKMKRSLTT 240 ARP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G53040.1 | 6e-42 | Nin-like family protein |