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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1034420.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NF-YC | ||||||||
Protein Properties | Length: 121aa MW: 13327.3 Da PI: 7.5812 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 110.5 | 9.3e-35 | 23 | 102 | 19 | 97 |
NF-YC 19 helPlarikkilk.adedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivp 97 h+lPlarikki+k + edvkmis eaP+++skacelfi elt rsw+ + e krrtl+k d+a+av tdifdflv v Pd.00g1034420.m01 23 HSLPLARIKKIMKkSGEDVKMISGEAPIVFSKACELFIEELTRRSWMTTLEGKRRTLHKDDVASAVVGTDIFDFLVSLVS 102 99**********73579**********************************************************98875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 121 aa Download sequence |
MRQPGRYSGF MMHGGISGRT GPHSLPLARI KKIMKKSGED VKMISGEAPI VFSKACELFI 60 EELTRRSWMT TLEGKRRTLH KDDVASAVVG TDIFDFLVSL VSDSCHSEDI TPEEKEALGG 120 S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G54830.3 | 1e-35 | NF-YC family protein |