PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g019810.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Nin-like

Protein Properties

Length: 930aa MW: 102267 Da PI: 5.3354

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g019810.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.8	2.5e-29	570	621	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek++sl++l++yFs+++kdAAk++gvc+T+LKriCRq+GI+RWP+Rki+++ Pd.00g019810.m01 570 AEKNVSLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKINKV 621 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 930 aa Download sequence
MEYPVTPKEK GSDHWASSRA QVENLGSLDV GTRNSISEDM FNNISELRNF DTYAGWCSPA 60 AMDQISASFG VPSCPSVTYA PLDALNFAEQ NGEALPGTEG GETFNVGGSS FSCEDKIVFQ 120 QMDTPQFGVS TDSQDANDLA AKLNNGSFQQ NNVMDVGKYM ISRPPGLSLN EKMLKALSLF 180 KESSGGGILA QLWVPVKYGD HYLLSTSEQP YLLDHILAGY REVSRTFTFP AEEKQGSILG 240 LPGRVFVSKV PEWTSNVSYY NKAEYLRVDH AVNHQVRGSI ALPVFNFDSE MSCCAVLELV 300 STKEKPNFDT EMEIVCNALQ AVNLRTMVPP RLLPQCLSMN QRAALTEITD VLRAVCHAHI 360 LPLALTWIPC CYSEGDGDEI RRVRVRGGIT NSNEKSILCI DETACYVNDR MMQGFVHACV 420 EHHLEVGEGI AGKALQSNHP FFLHDVKVYD IYEYPLVHHA RKYGLNAAVA IRLRSTYTGT 480 MQKMCKSLRT VSDAELAGVQ GSDTGFQKGP IPNSPQQRNS QTASSDSEFN SIENMPSDVF 540 NRRNAGIEAE NPCEQAPGSR RQMEKKRSTA EKNVSLSVLQ QYFSGSLKDA AKSIGVCPTT 600 LKRICRQHGI SRWPSRKINK VNRSLKKIQT VLDSVQGVEG GLKYDPTTGG FVATGSIIQD 660 FDAQKSRLFP EKSLPVQHSE LVTQDPVPVP SVSCNNGESV AIKLEEDGCC IPTSHEEGVK 720 KQNIPLMPQR DSKPIAMEGN KWGHSKNSLK LENSDCHFVS QSSSSLAAAD DMDTGVDGDD 780 GIVEYNQHTS SSMTDSTNCS GSTLRSSSSQ SFEEQKQPNM NSSSVENGSK ITVKATYKED 840 TIRFKFDPSV GCFQLYEEVA KRLKLQNGTF QLKYLDDEEE WVMLVSDADL RECLEILDDI 900 GTRSVKFMVR DTPFGVGSSG SSNCFLAGGL

Sequence ? help Back to Top

Protein Sequence Length: 930 aa Download sequence

MEYPVTPKEK GSDHWASSRA QVENLGSLDV GTRNSISEDM FNNISELRNF DTYAGWCSPA  60
AMDQISASFG VPSCPSVTYA PLDALNFAEQ NGEALPGTEG GETFNVGGSS FSCEDKIVFQ  120
QMDTPQFGVS TDSQDANDLA AKLNNGSFQQ NNVMDVGKYM ISRPPGLSLN EKMLKALSLF  180
KESSGGGILA QLWVPVKYGD HYLLSTSEQP YLLDHILAGY REVSRTFTFP AEEKQGSILG  240
LPGRVFVSKV PEWTSNVSYY NKAEYLRVDH AVNHQVRGSI ALPVFNFDSE MSCCAVLELV  300
STKEKPNFDT EMEIVCNALQ AVNLRTMVPP RLLPQCLSMN QRAALTEITD VLRAVCHAHI  360
LPLALTWIPC CYSEGDGDEI RRVRVRGGIT NSNEKSILCI DETACYVNDR MMQGFVHACV  420
EHHLEVGEGI AGKALQSNHP FFLHDVKVYD IYEYPLVHHA RKYGLNAAVA IRLRSTYTGT  480
MQKMCKSLRT VSDAELAGVQ GSDTGFQKGP IPNSPQQRNS QTASSDSEFN SIENMPSDVF  540
NRRNAGIEAE NPCEQAPGSR RQMEKKRSTA EKNVSLSVLQ QYFSGSLKDA AKSIGVCPTT  600
LKRICRQHGI SRWPSRKINK VNRSLKKIQT VLDSVQGVEG GLKYDPTTGG FVATGSIIQD  660
FDAQKSRLFP EKSLPVQHSE LVTQDPVPVP SVSCNNGESV AIKLEEDGCC IPTSHEEGVK  720
KQNIPLMPQR DSKPIAMEGN KWGHSKNSLK LENSDCHFVS QSSSSLAAAD DMDTGVDGDD  780
GIVEYNQHTS SSMTDSTNCS GSTLRSSSSQ SFEEQKQPNM NSSSVENGSK ITVKATYKED  840
TIRFKFDPSV GCFQLYEEVA KRLKLQNGTF QLKYLDDEEE WVMLVSDADL RECLEILDDI  900
GTRSVKFMVR DTPFGVGSSG SSNCFLAGGL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43500.1	0.0	Nin-like family protein