PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP045208.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | MYB | ||||||||
Protein Properties | Length: 225aa MW: 25557.7 Da PI: 10.4577 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 66.9 | 3.7e-21 | 29 | 76 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WTteEd++l++a++ +G ++WktI+++ g++R++k+c++rw++yl PCP045208.1 29 KGAWTTEEDQKLAKAIETHGAKRWKTISSKAGLNRCGKSCRLRWLNYL 76 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 51.8 | 1.9e-16 | 82 | 127 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + +E++l+v+++k+lG++ W++Ia +++ gRt++++k++w+++l PCP045208.1 82 RGNISDQEEDLIVRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNSHL 127 78999*****************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence |
MAPVTKESVN RRKMKGGEAM KNAKRKVNKG AWTTEEDQKL AKAIETHGAK RWKTISSKAG 60 LNRCGKSCRL RWLNYLRPNI KRGNISDQEE DLIVRLHKLL GNRWSLIAGR LPGRTDNEIK 120 NYWNSHLSKR MSQKEKENGA NLTRKMISTD HQKDHVQMKE DVSLQEAATS TSTTSASSSA 180 ASKGGDQNSN INIDVDDFFD FSNEGSLNLE WVSKFLEQDH GRWLN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G40330.1 | 2e-52 | MYB family protein |