PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP044935.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 245aa MW: 27884.4 Da PI: 9.8755 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 98.9 | 2e-31 | 25 | 74 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fs++g+lyey+ PCP044935.1 25 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLYEYA 74 79***********************************************8 PP | |||||||
2 | K-box | 107.7 | 1.3e-35 | 93 | 188 | 4 | 99 |
K-box 4 ssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 s++ s++ea ++++qqe+akL+++i nLq+ +R+++G+ L+s +k+L++Le++Lek++++iRskKnell+++ie++qk+e +l+++n+ Lr+k PCP044935.1 93 SNTGSVSEASTQYYQQEAAKLRAQIGNLQNANRNMMGDALSSVPIKDLKSLESKLEKGISRIRSKKNELLFAEIEYMQKRELDLHSNNQLLRAKAT 188 4444599*************************************************************************************9975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MANENKSLSI DSPQRKLGRG KIEIKRIENT TNRQVTFCKR RNGLLKKAYE LSVLCDAEVA 60 LIVFSNRGRL YEYANNSVKE TVERYKKACA DSSNTGSVSE ASTQYYQQEA AKLRAQIGNL 120 QNANRNMMGD ALSSVPIKDL KSLESKLEKG ISRIRSKKNE LLFAEIEYMQ KRELDLHSNN 180 QLLRAKATEN ERGQQNINVM AGGGPSSYDF LQSQPYDSRN YFQVNALQPN HQYNPRHDQI 240 SLQLV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18960.1 | 1e-112 | MIKC_MADS family protein |