PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP044895.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family HSF
Protein Properties Length: 274aa    MW: 30943.1 Da    PI: 7.8667
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP044895.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind101.66.8e-32141112102
                   HHHHHHHHHCTG......GGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXX CS
  HSF_DNA-bind   2 Flkklyeilede......elkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkke 92 
                   Fl+k++++le++        ++++sw+ +g+ f+v+ +++f++ +LpkyFkhsnf+SF+RQLn+YgFkk++++e         weFkh++F+kg +e
   PCP044895.1  14 FLSKTFDLLEENdggdggGKRNIVSWNVEGTGFIVWSPDDFSELLLPKYFKHSNFSSFIRQLNTYGFKKTSRKE---------WEFKHEKFQKGCRE 101
                   9*********8777777799**************************************************9998.........************** PP

                   XXXXXXXXXX CS
  HSF_DNA-bind  93 llekikrkks 102
                   +l +i rkk 
   PCP044895.1 102 MLVEITRKKC 111
                   *******986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MATKSSRTRS TAPFLSKTFD LLEENDGGDG GGKRNIVSWN VEGTGFIVWS PDDFSELLLP  60
KYFKHSNFSS FIRQLNTYGF KKTSRKEWEF KHEKFQKGCR EMLVEITRKK CEPSAFPVYL  120
KASEESGSTS TAVAAAEENN CLLLMEENKN LRKQKLELQV QIAQFKTLES YTVKGLYGRE  180
EALLEDLMEK GKATTARSWE IVAAGYANRS ETEKAFECMK AALCLSSEKR WKPNLRVVTT  240
VLSWLGDEGS AEDTEAFVGA LSNVIPVNKH MYHA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62020.14e-33HSF family protein