PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP044692.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

WRKY

Protein Properties

Length: 358aa MW: 40402.4 Da PI: 6.7073

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP044692.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	59.2	7.8e-19	214	253	20	59
S-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 20 fprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 f rsYYrCt+++C vkk+vers +dp++v++tYeg+Hnh+ PCP044692.1 214 FFRSYYRCTTQKCIVKKRVERSFQDPSIVITTYEGQHNHQ 253 77*************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MSNERKNPYQ YDPFDYNPHE INKSSFPFFN YGNSSTYQNQ PDDPQTLNGF ESDHPNPFMS 60 FTDCLHGSLD YNTLSKAFDM SCSSSEVISP PLDHDNNSNK AAGVGDHSVG TTGTTENPST 120 PNYSSISSSS NEAAGAAGDD QVLDDDSDHK SMKNKQPKLG SDGDHEDKSK KGSKAKKKEK 180 PQREPRFAFL TKNIYVIDIC GELTQVFNYY LLKFFRSYYR CTTQKCIVKK RVERSFQDPS 240 IVITTYEGQH NHQCPATLRG NLNLNAVGML SPNSLLAAAP LNGSARYSHE FLAQFLPVNN 300 QVELPNHYHD HPPSSMLYSN LMNPHRHHHH QQQQQQLHTP DYGLLQDLVH SFSHKQEP

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MSNERKNPYQ YDPFDYNPHE INKSSFPFFN YGNSSTYQNQ PDDPQTLNGF ESDHPNPFMS  60
FTDCLHGSLD YNTLSKAFDM SCSSSEVISP PLDHDNNSNK AAGVGDHSVG TTGTTENPST  120
PNYSSISSSS NEAAGAAGDD QVLDDDSDHK SMKNKQPKLG SDGDHEDKSK KGSKAKKKEK  180
PQREPRFAFL TKNIYVIDIC GELTQVFNYY LLKFFRSYYR CTTQKCIVKK RVERSFQDPS  240
IVITTYEGQH NHQCPATLRG NLNLNAVGML SPNSLLAAAP LNGSARYSHE FLAQFLPVNN  300
QVELPNHYHD HPPSSMLYSN LMNPHRHHHH QQQQQQLHTP DYGLLQDLVH SFSHKQEP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18170.1	3e-29	WRKY family protein