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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP044622.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | AP2 | ||||||||
Protein Properties | Length: 802aa MW: 89010.8 Da PI: 5.7766 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 28.7 | 3.3e-09 | 172 | 224 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpse.ngkrkrfslgkfgtaeeAakaaiaarkklege 56 s ++GV+++ gr+ A I+d +e k+ g f+ +e+Aa+a++ a++kl+ge PCP044622.1 172 SVFRGVSRHT-EGRFQAFIWDGTEpE---KKGKTGGFDKEEDAARAHDLAALKLWGE 224 689****998.8*********65533...5555688******************997 PP | |||||||
2 | AP2 | 31.7 | 3.7e-10 | 266 | 314 | 1 | 52 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkk 52 s y+GV++ + +++W A++ g ++ +lg+f t+e+Aa+a++ + + PCP044622.1 266 SNYRGVSRISGKKKWQARLGR----GkRHNGLYLGTFETEEQAARAYDIGAIR 314 57****************666....54459******************87766 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 802 aa Download sequence |
MNSSDSFCYS SPHSRRSTST VPKKSSYLGF VNDFDIHGSQ RYGLSPPVQM QSHFYANVQN 60 EGFTNFHNNT SEAMQDNATM QPQSPSILES ASFETPNYNS FSFLTNPFSS SLPLECDTGL 120 IGENYGKNNA VNIFGGPLMS IDEDNKGCTS PMNRQRRHPR QNSKHTIGNK KSVFRGVSRH 180 TEGRFQAFIW DGTEPEKKGK TGGFDKEEDA ARAHDLAALK LWGESAKLNF PTEQYKKDLE 240 EMQTMTKQDY FLHIRRASPS FAKGLSNYRG VSRISGKKKW QARLGRGKRH NGLYLGTFET 300 EEQAARAYDI GAIRTKGTDA ATNFDVSEND VNNILQSEKL PIGEGASKSL KFASSGDDFI 360 QSRRKTNKKT PFLQPYEDHR LGILNRISTQ PSSPFQETTL QTLPIYPNNS NRSQYVDPFL 420 QDFQNTDNIQ NNQLLQYYSV NPRSQVQDVP AGYQNANFET NRIFSHWDGN TYGGGDNSVG 480 SAINIGPVIP SQNHELNQFQ YYNNDAYGQK LSQNPNSSYL NSHVSAYPQT INPTFLPGLN 540 NLHTCSSYIG ECSSSQAEVS LGTILGETDK SLGSDIVSEV VPVADLEVHV NPIERNSISV 600 LPEDRENRSA GYQNANFETN RIFSHWDCNT DGGGDNSVGS AINIGPVIPS QNHELNQFQY 660 YNNEAYGQKL SQNPNSSYLL QNSHVSAYPK TINSTFLPGL NNLHTCSSYI GECSSSQAEV 720 SLDTILGETD ESLGSDIVSE VVPVADLEVH VNPIERILVL PGDRENGRVV EVSGVSKSGH 780 VLDNSSWKDL LFMSLNDPDC KL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51190.1 | 4e-55 | AP2 family protein |