PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP044561.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | CPP | ||||||||
Protein Properties | Length: 952aa MW: 104099 Da PI: 7.1894 | ||||||||
Description | CPP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCR | 48.9 | 1.3e-15 | 494 | 530 | 3 | 39 |
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 +k+CnCkk+kClk+YC+Cfaag++C+e+C C++C+N PCP044561.1 494 CKRCNCKKTKCLKLYCDCFAAGVYCAETCACQGCFNI 530 79**********************************6 PP | |||||||
2 | TCR | 30 | 1e-09 | 571 | 593 | 1 | 23 |
TCR 1 kekkgCnCkkskClkkYCeCfaa 23 ++k+gCnCkks ClkkYCeC++ PCP044561.1 571 RHKRGCNCKKSMCLKKYCECYQV 593 589******************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 952 aa Download sequence |
MDSPEIPKIM SNTSPSSDSP PVQESPVFSY ISNLSPIQPV KASHAAQGFP GLSSPPLVFT 60 SPRVNTLRET SFLKSFMIFI RPQYPQLSGA EKPKAQDEAK KFVDGPVDSK KHITQLQMGS 120 ITDTQDCETN SSSEGVDEYL ADPMEMDGTN SAQSVNPCLK ESKNSYKSEE PSEQATEDLQ 180 GKQIFDAKPV KIKELSHGAL PTSERPKVGS RISVDNAFNG EYHHGLHNQD VIVGHVLTLY 240 PTFKSQGFGG EHQDDCDHTR QSPPGRLQIG QVYEDCTENV SGTSKGMIGN MILHAPNKVK 300 NDQGGMHRRC LQFEEAPPCA TGKRDSSSKE KVNNSEPPAS TAELEIVKVS YAATSKRQMG 360 ASLPPLYGGS SPLTVPKPSG IGLHLNSIVN AVPVVRGATS IKLADHYIGL QVMKSSAVVS 420 HLLLENVRDD TETSIAASSS ITQSPHTVEF EHHGSPLEER KSDSQNVDSY KELNQYSSQK 480 KRKGTPSSKD SDGCKRCNCK KTKCLKLYCD CFAAGVYCAE TCACQGCFNI PDYEDTVLET 540 RQQIEARNPL AFTPKIVQLE EEIQFTPASA RHKRGCNCKK SMCLKKYCEC YQVSNTYLYF 600 HVTVLVIFSF SIHPKFVNHF ILKANVGCSS GCRCDGCKNV YGRKGDYGPI DHGVTKDMIS 660 DKAGKETFDE KLEMVATKKD ALSIELYDSH NHTPLTPSFQ CSDHADNVPK SPCLLTSYLR 720 SPESDLTVIS SYEKSARSSL RNSETSGILL ETSKELSDMG YYCWQEDYDN IGIADTFSPR 780 HDAAPTICHI TPLSDLCSKA SASSTSSRSH WKNASQIQLC PGSQGLSSNS SLRWCSSPLT 840 PMTQLGGMEC SQGLDFDHGL SDIMQEEMPE ILKDISATNK SVKVSSPNKK RVSPPHNHNH 900 ELGASSSGSL RSGRKFILKA VPSFPPLTPC SSSKGSNTIQ STGNLHDKGR KK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G22780.1 | 4e-54 | CPP family protein |