PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP044001.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

CPP

Protein Properties

Length: 899aa MW: 97597 Da PI: 6.7879

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP044001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	49.7	7.4e-16	475	511	3	39
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 +k+CnCkkskClk+YC+Cfaag++C+e+C C++C+N PCP044001.1 475 CKRCNCKKSKCLKLYCDCFAAGVYCAETCACQGCFNI 511 79**********************************6 PP
2	TCR	50.3	4.6e-16	552	590	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks ClkkYCeC++a++ Cs+ C+C++CkN PCP044001.1 552 RHKRGCNCKKSMCLKKYCECYQANVGCSSGCRCDGCKNV 590 589***********************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 899 aa Download sequence
MDSPEIPKIK ANTSPSSDSP PVQESPVFSY ISNLSPIQPV KASHAVQGFP GLSSPPLVFT 60 SPRINTLRET SFLKSFFIFT RPQYPQLSSV GKTKAHDEAK TFVDVPVDSK KHITQLQMGL 120 ITDTQDCETN SSSEGVDEYL ADPMEMDCTN SCQSVNPCLK ESINASESEA PPEKAKEDLD 180 GKQFDPKPVK NKVHSDGELP SSECPKVGSG LSIDNAFNGE HHLGFHNQGI GGRQQDDCDH 240 NPPSPPGRLQ IGQVYEDCTE KVGGTSKGMI GNMILHAPNK AKNDQGGMHR RCLQFEEAPP 300 CATGKGDSSS VEKVNNSEPP ASTAELEIVQ VPNAATSKRQ MGASLPPRYG GTSPLTVPKP 360 SGIGLHLNSI VNAAPVVRGA TTIKLADHYI GVQVMKSSSV VNHHLPENVR DETENSIAAS 420 SSITQSPDTV EFERHGSPPE KSKVDSQNVD SYMELNQSSS QKKRSEACSK DSDGCKRCNC 480 KKSKCLKLYC DCFAAGVYCA ETCACQGCFN IPDYEDTVLE TRQQIEARNP LAFAPKIVQL 540 EEEIQFTPAS ARHKRGCNCK KSMCLKKYCE CYQANVGCSS GCRCDGCKNV YGRKGDFVPI 600 EHGVIKDTIS DKAGKETFDE KLEMVATKKD ILSTDLYDSH NHTPLTPSFH CSDHANNIPK 660 SPCLPTSYLR SPESDLTIIS SYEKSTRSPL RNSKTGGILL ETSKELSNMG YYHWREDYDN 720 IGVADTFSTR YDAAPTTCHI TPLSDLYSKA SASSTSSRSD WKNASQAQLC PGSQGLSSSS 780 SLHWCSSPVT PMARLGGTKS SQGLDFDNGL YDFLQEETPE ILKDSSNPIR SVKVSSPNKK 840 RVSPPHNHNH ELGASSSGSL RSGRKFILKA VPSFPPLTPC SNSEGSNIIQ NTSNLHNKG

Sequence ? help Back to Top

Protein Sequence Length: 899 aa Download sequence

MDSPEIPKIK ANTSPSSDSP PVQESPVFSY ISNLSPIQPV KASHAVQGFP GLSSPPLVFT  60
SPRINTLRET SFLKSFFIFT RPQYPQLSSV GKTKAHDEAK TFVDVPVDSK KHITQLQMGL  120
ITDTQDCETN SSSEGVDEYL ADPMEMDCTN SCQSVNPCLK ESINASESEA PPEKAKEDLD  180
GKQFDPKPVK NKVHSDGELP SSECPKVGSG LSIDNAFNGE HHLGFHNQGI GGRQQDDCDH  240
NPPSPPGRLQ IGQVYEDCTE KVGGTSKGMI GNMILHAPNK AKNDQGGMHR RCLQFEEAPP  300
CATGKGDSSS VEKVNNSEPP ASTAELEIVQ VPNAATSKRQ MGASLPPRYG GTSPLTVPKP  360
SGIGLHLNSI VNAAPVVRGA TTIKLADHYI GVQVMKSSSV VNHHLPENVR DETENSIAAS  420
SSITQSPDTV EFERHGSPPE KSKVDSQNVD SYMELNQSSS QKKRSEACSK DSDGCKRCNC  480
KKSKCLKLYC DCFAAGVYCA ETCACQGCFN IPDYEDTVLE TRQQIEARNP LAFAPKIVQL  540
EEEIQFTPAS ARHKRGCNCK KSMCLKKYCE CYQANVGCSS GCRCDGCKNV YGRKGDFVPI  600
EHGVIKDTIS DKAGKETFDE KLEMVATKKD ILSTDLYDSH NHTPLTPSFH CSDHANNIPK  660
SPCLPTSYLR SPESDLTIIS SYEKSTRSPL RNSKTGGILL ETSKELSNMG YYHWREDYDN  720
IGVADTFSTR YDAAPTTCHI TPLSDLYSKA SASSTSSRSD WKNASQAQLC PGSQGLSSSS  780
SLHWCSSPVT PMARLGGTKS SQGLDFDNGL YDFLQEETPE ILKDSSNPIR SVKVSSPNKK  840
RVSPPHNHNH ELGASSSGSL RSGRKFILKA VPSFPPLTPC SNSEGSNIIQ NTSNLHNKG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22780.1	4e-74	CPP family protein