PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP043987.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family B3
Protein Properties Length: 480aa    MW: 53546.2 Da    PI: 8.8687
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP043987.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B363.82.7e-20113203199
                  EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
           B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                  f+k l++s+v +  ++ lp  f+++h  +  +++t+tledesgr++++k+i +k++    l++GW++F+ +++L egD++vF+l++ ++f  +v ++r
  PCP043987.1 113 FVKSLVRSHVASCFWMGLPSLFCKSHLPD--KDITMTLEDESGRQYQLKYIACKTG----LSAGWRQFAASHNLLEGDVLVFQLVEPTKF--KVYIIR 202
                  89************************644..678****************777776....***********************9876666..999888 PP

                  S CS
           B3  99 k 99 
                  +
  PCP043987.1 203 S 203
                  6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 480 aa     Download sequence    
MARKVDGKSQ TPPSKPRLRP KPAANPKPSS LTGKVKKPGK PNEKEVEHSM PMKELSNTQI  60
TKMLSHAGKS PAISNTQYEF PVDGSPSRGQ AKSSAVIRAQ EVRSKLERQF PSFVKSLVRS  120
HVASCFWMGL PSLFCKSHLP DKDITMTLED ESGRQYQLKY IACKTGLSAG WRQFAASHNL  180
LEGDVLVFQL VEPTKFKVYI IRSNGIAEVD GALCLLNLDN NTKQKDSGKF INLSVYKDNA  240
ETSTTPCNDS IRKRAHSPQL VVPKKKKIGL QRAEQSENDS EEAGSEVSED LKSPAAALQF  300
EDIRSYENFH ILVDGLFLDS EVPEDVRKKY YKLCRSQKAF LHENVIKGMN PNLIIGAISE  360
TVNIADSIKA CKVTTPRDDF VSWDKYLTAF ELLGMNVGFL RDRICRLANL ADDSGAALEA  420
KMYKEARIER SQAGIGIRNI EVKLEEMREA CDEFGAAIES LRSKAEINTL KFQEEVTAPW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1252267RKRAHSPQLVVPKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.13e-37B3 family protein