PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP043967.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | MYB | ||||||||
Protein Properties | Length: 639aa MW: 71499 Da PI: 7.2099 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.3 | 1.3e-16 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd +l+ +++q+G+g +W + ++++g+ R++k+c++rw++yl PCP043967.1 14 RGPWSPEEDAKLKSYIEQHGTGgNWIALPQKIGLQRCGKSCRLRWLNYL 62 89*********************************************97 PP | |||||||
2 | Myb_DNA-binding | 38.6 | 2.6e-12 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd ++ + G++ W+ Ia+ m+ gRt++++k++w++ PCP043967.1 69 GGFSEEEDNIICSLYISIGSR-WSIIAAQMP-GRTDNDIKNYWNT 111 569******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 639 aa Download sequence |
MGRAPCCDKA NVKRGPWSPE EDAKLKSYIE QHGTGGNWIA LPQKIGLQRC GKSCRLRWLN 60 YLRPNIRHGG FSEEEDNIIC SLYISIGSRW SIIAAQMPGR TDNDIKNYWN TRLKKKLLGR 120 QRKEHQLARK SGLVKQDTIK RSGGVGGNST NSHSAVPATD DQNPYWPELP VHAVPTVLPQ 180 QQQQPCFNDH ASLRKLLIKL GGRFGSDVNH NHETNQVIQG RPANIQPTYQ VLDDDNYSPY 240 AAAAAATQQM DEHYSGKNMQ SLLIPRCGIH ALNDSSLSLS NDVISPHQFA QTHYIVNTDN 300 IDGPGNGIMN NMFQGQGGNY ETDQLKEMVV YNNNDNQHRF DGLEFFCGEE MMVNNRITSS 360 YGESIGWGEM LGCPPVASSS DDYHDSMDRL IMPATPGQEC GFANDQTNQT PSMAIPASIL 420 SPPSAIPKFS IELFKQKQFR FQTSFPPSRV KAVSSTAQFG EPNKENKQKL QIKSTFVKEK 480 LWEAVPAPVK ELPWRKAADT ALEQLLLLGK KALIWSFVTF GTLSFLSDII FSISRNYELM 540 IPFGLFVGCF LTDVLKETLQ QVLPRSEENA NEIEKHLFGI SCFFAAVKFI SAGLPMQARV 600 FLLHVANGGF LQVLWLWRGF FNEKDEDDGV DNSNSSLVM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G49690.1 | 3e-77 | MYB family protein |