PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PCP043871.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
|
||||||||
Family | FAR1 | ||||||||
Protein Properties | Length: 143aa MW: 16530.8 Da PI: 5.3817 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 39.6 | 1.7e-12 | 61 | 130 | 2 | 71 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkke 71 fY++YA +GF + ++skks++ + ++r+fvC k+gk++ + +++ +++ +r+e + kakl+ k PCP043871.1 61 FYKNYALAAGFGIWEHNSKKSSDGDYLVRREFVCCKQGKKKVDANSKPNRKCRRVEVGSDWKAKLVPYKG 130 9******************************************999777777888888888888775554 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 143 aa Download sequence |
MNYSSMEDEL EIEEIIKEKA DEGARDQFGA GMVELVVPTV DDELKSILKM KFDSLDEWYI 60 FYKNYALAAG FGIWEHNSKK SSDGDYLVRR EFVCCKQGKK KVDANSKPNR KCRRVEVGSD 120 WKAKLVPYKG IDNEKSVVTF FHE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G22170.2 | 2e-06 | FAR1 family protein |