PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP043474.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

FAR1

Protein Properties

Length: 516aa MW: 57832.7 Da PI: 7.4561

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP043474.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	83.9	2.5e-26	69	154	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fY++YAk+vGF + k +s++s+ ++e+++++f C ++g++++++++ ++r++ ++gCka+++vk++ +g+w+v++++++HnHel p PCP043474.1 69 FYKAYAKSVGFGTAKLSSRRSRASKEFIDAKFSCIRYGNKQQSDDA----INPRPSPKIGCKASMHVKRRPNGNWYVYSFVKDHNHELLP 154 **************************************999877....9**********************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 516 aa Download sequence
MSVGHMKTFA PLSFPTTFEG GCGVDLNFPT ATTTTVMDSS GPALALATTS IAEPHDAMEF 60 ESHEAAYTFY KAYAKSVGFG TAKLSSRRSR ASKEFIDAKF SCIRYGNKQQ SDDAINPRPS 120 PKIGCKASMH VKRRPNGNWY VYSFVKDHNH ELLPDQAHFF RSHRNTDPLN NDVRIRRRKS 180 LAAVSSLFSA YQNVDWETSL QEFMERYRAI LEDRYEEEAK ANFDAWHGTP ELKSPSPFEK 240 QMSLVYTHEV FKNFQVEVLG AAACHLKKEN EDETATTFSV KDFEDNQNYT VEWNESKSDI 300 YCSCHSFEYK GYLCRHAIVV LQMSGVFIIP PKYILQRWTN AAMSRHAIGE RVDEVQSKAR 360 RYNDLCRRAI ILGEEGSLSQ ESYDVALSAI KEALKQCASL TNCLENNAKP HDSAIHGVCG 420 VDEENQCSTT SGANKTPRRA GSGKEVARNG NSTSKKGKVP QLEVTSFGTQ VGHFQMQLSD 480 SRPMQLHNAV PTMFQSVAST QLHNAASTHV HENLPQ

Sequence ? help Back to Top

Protein Sequence Length: 516 aa Download sequence

MSVGHMKTFA PLSFPTTFEG GCGVDLNFPT ATTTTVMDSS GPALALATTS IAEPHDAMEF  60
ESHEAAYTFY KAYAKSVGFG TAKLSSRRSR ASKEFIDAKF SCIRYGNKQQ SDDAINPRPS  120
PKIGCKASMH VKRRPNGNWY VYSFVKDHNH ELLPDQAHFF RSHRNTDPLN NDVRIRRRKS  180
LAAVSSLFSA YQNVDWETSL QEFMERYRAI LEDRYEEEAK ANFDAWHGTP ELKSPSPFEK  240
QMSLVYTHEV FKNFQVEVLG AAACHLKKEN EDETATTFSV KDFEDNQNYT VEWNESKSDI  300
YCSCHSFEYK GYLCRHAIVV LQMSGVFIIP PKYILQRWTN AAMSRHAIGE RVDEVQSKAR  360
RYNDLCRRAI ILGEEGSLSQ ESYDVALSAI KEALKQCASL TNCLENNAKP HDSAIHGVCG  420
VDEENQCSTT SGANKTPRRA GSGKEVARNG NSTSKKGKVP QLEVTSFGTQ VGHFQMQLSD  480
SRPMQLHNAV PTMFQSVAST QLHNAASTHV HENLPQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76320.1	1e-124	FAR1 family protein