PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP043183.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | GRAS | ||||||||
Protein Properties | Length: 200aa MW: 22258.2 Da PI: 8.6239 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 103.7 | 2.6e-32 | 66 | 181 | 3 | 118 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100 +lL+ecA+avs++d +++++lL+ l+elasp+gd q+la+yf++AL + ++s+ ++yk+l++ ++++++ +++ + f+e+sP+ +f+h++ N PCP043183.1 66 RLLMECARAVSEKDSSKISHLLWMLNELASPYGDFEQKLASYFLQALFCKATDSGLRCYKTLSSVAEKSHSFDSARKLILKFQELSPWTTFGHVASNG 163 79************************************************************9999985554444445445***************** PP GRAS 101 aIleavegeervHiiDfd 118 aIlea+ege+++HiiD++ PCP043183.1 164 AILEALEGETKLHIIDIS 181 ****************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence |
MDISLFSPNK EANFLQQYSN QIKINGLAAA IDMQSTNQQT QNSHTSTSRS SGSSEPCPAG 60 TKWASRLLME CARAVSEKDS SKISHLLWML NELASPYGDF EQKLASYFLQ ALFCKATDSG 120 LRCYKTLSSV AEKSHSFDSA RKLILKFQEL SPWTTFGHVA SNGAILEALE GETKLHIIDI 180 SNTLLHPMAY FVRSFGHKKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37650.1 | 3e-53 | GRAS family protein |