PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP042775.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | C2H2 | ||||||||
Protein Properties | Length: 178aa MW: 19298.7 Da PI: 9.4873 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 10.8 | 0.0015 | 30 | 52 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ F++ L H +H PCP042775.1 30 FECKTCNRQFPSFQALGGHRASH 52 89**********99999998887 PP | |||||||
2 | zf-C2H2 | 12.4 | 0.00048 | 84 | 106 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F+ L H+r+H PCP042775.1 84 HECNICGLEFPVGQALGGHMRRH 106 79********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence |
MANCLMLLSR GINNNANQYD SFSVSPNRVF ECKTCNRQFP SFQALGGHRA SHKKPRLTGS 60 SGEGNSNSSD PSLSQGSPPK PKTHECNICG LEFPVGQALG GHMRRHRAAL SSCNTTSNVH 120 ERYSSSNSLN PQPAQVFQVL KKTNSGRRAM CLDLNLTPLE NDLETLQLGK AAPLVGFL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G59820.1 | 6e-39 | C2H2 family protein |