PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP042574.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | TCP | ||||||||
Protein Properties | Length: 450aa MW: 50258.6 Da PI: 9.3411 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 142.3 | 3.8e-44 | 161 | 306 | 2 | 130 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..................ssssaseceaesssss 81 gkkdrhski+T++g+RdRR+Rls+++a++fFdLqd+LGfdk+sktieWL++++k+aik+l + + ++s PCP042574.1 161 SGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLFTKSKTAIKDLKQHllvspkedysstnggataK------------VNS 246 69**************************************************************9988766655444332221............111 PP TCP 82 asnsssg..............kaaksaakskksqksaasalnlak.esrakarararertrekm 130 ++ + +aak + + ++++++ +l++ + esr +arararertrek PCP042574.1 247 SE----SttgdvaskimepnsSAAKGDISVGLAREKKNRKLSVVArESRVEARARARERTREKL 306 11....0111233345555545555555555555555555555555****************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 450 aa Download sequence |
MFPSSSTTSN SQLPFLCDDN HTNGIIDDFH QNPNSISSHG GHHQYYSQYY YSDDQQQQQQ 60 APDFLEHDGM LLSYLLSQQQ LLIDNSSTTN VATHSNHIRA HSSAKISIVD SNSNKTMELI 120 NRADQITVIP AADSQIKKNN VKMNGEGGGE KKEKFARKRA SGKKDRHSKI YTAQGPRDRR 180 MRLSLQIARK FFDLQDMLGF DKASKTIEWL FTKSKTAIKD LKQHLLVSPK EDYSSTNGGA 240 TAKVNSSEST TGDVASKIME PNSSAAKGDI SVGLAREKKN RKLSVVARES RVEARARARE 300 RTREKLMRIR GFDQDHQSTK QSHKHQEQQN PNELFETAGM MNSMMMSMNR PNDEASGENS 360 EDCDFPGNWG AINNTKNIIT GNVLQVVQNP TSYPKQQNPS SIFGTGTQEQ NPNSIFLNTL 420 AKAQDQNSTT SSNFEINSNI STLQPLFTGN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68800.1 | 9e-33 | TCP family protein |