PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP041767.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | MYB | ||||||||
Protein Properties | Length: 240aa MW: 27634.9 Da PI: 5.2165 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 31.6 | 3.7e-10 | 14 | 60 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W +eEde+l+ +v++ Gg++W++ ++ g++R++ +c r ++y PCP041767.1 14 KGPWLEEEDERLKTYVNLKGGRRWDALVKESGLRRSGRSCSMRSLNY 60 79**************************************7776666 PP | |||||||
2 | Myb_DNA-binding | 41.3 | 3.6e-13 | 74 | 112 | 8 | 48 |
HHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 8 EdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 E++ ++++++++G++ W+ I++ ++ gRt++++k++w+++l PCP041767.1 74 EEKTILQLHQRWGNK-WSMISQALP-GRTDNEIKNYWRTHL 112 99*************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence |
MTCLAAVEGE NLLKGPWLEE EDERLKTYVN LKGGRRWDAL VKESGLRRSG RSCSMRSLNY 60 LCPNIKHGKI TIIEEKTILQ LHQRWGNKWS MISQALPGRT DNEIKNYWRT HLKKKIEIQD 120 GNFQCTLNKN QQGIFCQEGD MNEEKYDFDQ NHVSVKNLFE TKVTSSDDLG LSDFAATNSP 180 YETQLSEWIS ELSSEQSGTT YNQDCNSVES DLCHLKWTPD DSDAWDSPAS EVLAYLLRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G53200.1 | 5e-53 | MYB family protein |