PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP041718.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | C2H2 | ||||||||
Protein Properties | Length: 699aa MW: 77573.6 Da PI: 8.1124 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14.2 | 0.00013 | 76 | 97 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 kC +C++ F ++ n++rHir+H PCP041718.1 76 KCDKCPREFCSSINYRRHIRVH 97 7********************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 699 aa Download sequence |
MSIAKPTTSN SLYAMKSEEE SDSLDTIIRQ AAKEPSISFS RAGDSPVPWI QLLHALDQQE 60 LPGWPLHSPI KVQMQKCDKC PREFCSSINY RRHIRVHHRL KKLDKDSSKN RELLGEFWDK 120 LSPEEAKEAV SFKNVTLEEV PGSSIIKALT TLIRKQGFSL SPTLFEGRFS LLDIVQARPS 180 RFPISSQELF SILDDASEMT FLSGTAISMQ RYIFDGEAGK IGLESKNLVA CTSFLVEQKL 240 LKAWHADKDT EALRLQKLLV EEEEAAQRRQ TELLERKRQK KLRQKEQKEK DQGNGEKIDV 300 KENIDETLDA VPLVETSSPS ATFDSDTASS DMLDHACLSL ESFQLSNTDV SADPESQTRV 360 SFGHVDSTSG PNVERRVVQG NGSRRAAARW QLSPKSQRGV PNGFHGGHSS QTSKHSSTQH 420 HGNHRDARAA SSGNRVWSRK PKPEYDGRSL KAGVQKVASE PDQIKNREVL IGSIPVNLGN 480 CCQESNNQAG VHDECLSEKG QVPKHNSQDK THKPDLVQSG TNRSTVKLWR PVSRNGTKGP 540 MPIQNGSKES DINVVAEKGN SQNLHSENCE RSCVVDGHDV GNGNDSTHPD ETGRLGFSSH 600 AAKDFLAQRW KDAIAADHVE LVLFQDSEPP RCPENQDDRE VAATHPSRFK RSILGNAENR 660 LANGDAFDLP TAGAAKVRRR TKHDKGVKIK YIPKHSAVA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 275 | 282 | ERKRQKKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25610.1 | 1e-116 | C2H2 family protein |