PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP041694.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

Protein Properties

Length: 890aa MW: 98140.2 Da PI: 6.6715

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP041694.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	60.4	3.2e-19	320	420	1	99
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 f+kvl+ sd+++ grlvlpk +ae++ +++ e+ ++++d +g++W++++++ +++s++yvl+ G ++ +L++gD+v+F++++ +++lv+ PCP041694.1 320 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQSEGLPIRIQDVKGNEWTFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRID-PGGRLVI 415 99************************555556677***********99899999999.*******************987.8999999 PP EEE-S CS B3 95 kvfrk 99 +++++ PCP041694.1 416 GFRKA 420 99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 890 aa Download sequence
MDSKICMNPS CRTANTHEWK KGWPLRTGGF AHLCNKCGVE YENSVYCNTF HSGETGWRDC 60 NLCHKPLHCG CIVSETLYEC LDFGGIGCIG CASQPRVIQN DDVLNGFGGL KISNSGDQQS 120 TVPQNGALSD TANEGKLLQL CQVMEANESN LSSQSQRSDI NVSPVQTKRE EVTYPKGEVG 180 PGFSSITRPS IGSLTFTKPD NGRIMIGVKD MNNPSSEPSL SMTLGGPSAT PNFAQPFTGG 240 ILEGRDQSKM PSSFQQGQKI RPILPRPLRP PSPVHHVRVA RPPSEGRGKS QLLPRYWPRI 300 TDQELQKLAG DLNSTIVPLF EKVLSASDAG RIGRLVLPKA CAEAYFPPIS QSEGLPIRIQ 360 DVKGNEWTFQ FRFWPNNNSR MYVLEGVTPC IQSMQLQAGD TVTFSRIDPG GRLVIGFRKA 420 SRSLDMQDPQ TSFLPNGTPG ETSCPSVVEN LVSGSGQSSL YQTNTGSKDP YLNALSGHLH 480 LADGDTSLHN CENHSHLTSE DLLQRPVSNS DKKRARNIGP KSKRLLLHRE DVLELRLTWE 540 EAQDLLRPPP SVKPSIVTIE DHEFEEYDEP PVFGKRSLFI AESERQEQWA QCDDCFKWRR 600 LPVNVFLPPK WTCSENSWDM NRCSCSAPEE VSQKELDNLL RPSIDLKKRR IVVNHNEAQE 660 HEPSGLDALA SASAAILGDN VDYSGDQSLG ATTRHPRHRP GCTCIVCIQP PSGKGKHKPT 720 CTCNVCMTVK RRFKTLMMNK RKRKSEREAE NAQRDNNDHK DESEMNGTST EIELHMNHSS 780 ENGSSSEKRI EADVAESSCA GQIDLNCEPK HNYVQVSGLN LLRLADAVAC QPVKNGTKES 840 FLTNKTCEPQ AGLGSSLLAQ ETAETDRLMC NEGSLSSVAA WDLEGRGGVD

Sequence ? help Back to Top

Protein Sequence Length: 890 aa Download sequence

MDSKICMNPS CRTANTHEWK KGWPLRTGGF AHLCNKCGVE YENSVYCNTF HSGETGWRDC  60
NLCHKPLHCG CIVSETLYEC LDFGGIGCIG CASQPRVIQN DDVLNGFGGL KISNSGDQQS  120
TVPQNGALSD TANEGKLLQL CQVMEANESN LSSQSQRSDI NVSPVQTKRE EVTYPKGEVG  180
PGFSSITRPS IGSLTFTKPD NGRIMIGVKD MNNPSSEPSL SMTLGGPSAT PNFAQPFTGG  240
ILEGRDQSKM PSSFQQGQKI RPILPRPLRP PSPVHHVRVA RPPSEGRGKS QLLPRYWPRI  300
TDQELQKLAG DLNSTIVPLF EKVLSASDAG RIGRLVLPKA CAEAYFPPIS QSEGLPIRIQ  360
DVKGNEWTFQ FRFWPNNNSR MYVLEGVTPC IQSMQLQAGD TVTFSRIDPG GRLVIGFRKA  420
SRSLDMQDPQ TSFLPNGTPG ETSCPSVVEN LVSGSGQSSL YQTNTGSKDP YLNALSGHLH  480
LADGDTSLHN CENHSHLTSE DLLQRPVSNS DKKRARNIGP KSKRLLLHRE DVLELRLTWE  540
EAQDLLRPPP SVKPSIVTIE DHEFEEYDEP PVFGKRSLFI AESERQEQWA QCDDCFKWRR  600
LPVNVFLPPK WTCSENSWDM NRCSCSAPEE VSQKELDNLL RPSIDLKKRR IVVNHNEAQE  660
HEPSGLDALA SASAAILGDN VDYSGDQSLG ATTRHPRHRP GCTCIVCIQP PSGKGKHKPT  720
CTCNVCMTVK RRFKTLMMNK RKRKSEREAE NAQRDNNDHK DESEMNGTST EIELHMNHSS  780
ENGSSSEKRI EADVAESSCA GQIDLNCEPK HNYVQVSGLN LLRLADAVAC QPVKNGTKES  840
FLTNKTCEPQ AGLGSSLLAQ ETAETDRLMC NEGSLSSVAA WDLEGRGGVD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	730	744	KRRFKTLMMNKRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	0.0	B3 family protein