PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP041655.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | C2H2 | ||||||||
Protein Properties | Length: 235aa MW: 27120.5 Da PI: 6.9993 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.6 | 0.0002 | 107 | 130 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 ++C++C+ksF+ + L +H + H PCP041655.1 107 WQCGYCKKSFRAEMFLDQHFDNrH 130 58***********99999976655 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
MKKTNLCVSI LLFLSFSILQ VSSLTQTNQD FEKSESSRTL EQGQEHAHEV HCSRDRSRAA 60 WQIIEKYLMP FVEHEHYEIP SNCRLHPDND LFRDQEEHKI HLDINEWQCG YCKKSFRAEM 120 FLDQHFDNRH YNLLNVSGSK CLADLCGALH CNAVMNTKSS KTKCNPAAVA RNHHLCEGLA 180 NSCFPINQSP SARRLNETYK CILPGYVHTD FDAAPYFLSD SVFAPKRDEE RNPRA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G63280.1 | 3e-86 | C2H2 family protein |